Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00169 ATGGGTGATTTTGGTAAAGCTTTCAAAGAAACGGCACACCAAACATTCTCAGGACAACAACTGGAGCATGGCATGTCCAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTATTTGGATGGGATGAGAGCAATCACAGGAGTGATGCTGAACTAGTCGACAAAATTGTTAAAAGCCTTCTTAGTTTACCAGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATACCAAGTGGAGGATCTGATTGGAACTATCAAAAGTAAATCCACGGAAGATTGTAGGATAGCGATATGTGGACAGGGAGGATGTGGTAAAACCACCCTTGCAAAAGCCATCTATAATCAAATTCATGGTACATTCACGGAGAAAAGTTTCATTGAAGATATTGGACAATTTAGTGGAATAAGAGGGGATCTTCGTTTACAAGAACAACTTCTTTCAGATGTCCTAAAAACAAAGGTGAAGATAAGCAGCGTTGAGATGGGAAAAAGAATGATTCGGGAAAGACTTTCTGGGAAAAGGGTGTTCATTGTACTTGACGATGTGCCTGAGTTTTGTGCATTACTCGACATATGGGAATGCCGCCGTTGCTTCAGTGGAGGAACTATAATAATAATTACAACGAGAGATGAACACATACTGAGGATACATGAAGTTGATTCTGTTTATCGGATAACTCCAATGAGCCCAAACGAATCCCTTGAGCTTCTTAGCTGGTACGCATTTAGAGAACCAAAACCAAAAGAAGAATACCATTTCCTTGCAAAAAGAGTAGTTGCTTATTGTGGAGGACTACCTCTTGCTCTTGAAGTCATTGGAAGTTACTTATATGAAAGGAAGAAAAAAGAATGGGATAGAGTAATTTTAAGATTAGACAATATTCCTCAGCATGAAATGTCACATATATTGAAAATAAGCTTCGACGGTTTACATAGTGAAATGGAAAAAGATTTATTTCTTGATGTGTGTTGTTTCTTTGTTGGTAAAAGCAGAGCCTATGTTACCAAGATCCTAAGTGGCTGTGGAGTAGACCATGATAGTGGAATAAGAGTTCTCATACAGCGTAACCTCATAAAAGTTAAAGAAAACAACAAATTTGGAATGCATCATTTGCTACGAGAAATGGGAAGAGAAATTATTCGTCGAATTTCAGGAAAGGGACCTGAGGAACCTGGGAAGAGAAGTCGACTGTGGCTTGATGAGGATATGGAACATGCGCTATCTGATAATACTCTCTTTTCGTCACAGGAGACAAAAGTCATTCAGAGATTGCCTTTGAAAATGCTTTTAACAACAAAAGATTTCTTCCACCGTTATCCTTTAGTGGTAAGAGACACATCAAGACTGCTGAGATTCGCAGAAAATTATGAGTACCACTATACGAAACTGAGATGGTTCAGTTTGCAAGGGTTTTCTTCAGAACACCTTCCTAATGACTTTTTTCTGCATTATGCAATAGCAATTGATTTAAAATACAGTCTTCTTCAATTCGTCTGGAATGAACCCCAGGTTTTGGCGTGGCTAAAAGTCCTTAATCTTAGTCACTCCAAGTACTTGACAAAAACCCCTGATATTTCGAGACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGCCCAGAATTGCGCGAAGTACACCCTTCTATTGGATGTCTCCGCAATCTTATACTGCTAAATTTGAAGGATTGTACAAGTCTAAGCAATCTGCCCAGAAAGATATATAAGTTGAAGTCTTTGAAAACTCTCATTCTCTCTGGTTGTTCGAAGATTGACCTATTGGAAAAAGATATAGTGCAGATGGAATCATTGATAACACTAATTGCTGAAAATACAGCTGTCAAACAAGTGCCTTTTTCAATTGTATACTCAAAAAGCATTGGATATATATCCCTTAGTGGATTTGAGGGATTGTCACATAATCTTTTTCCTTCTATCATTAGGTCTTGGATATCACCAACAATGGATCCCCTATCTTATATACATTTGGTTTATGAGGAGGATAGTAGTTGGGATGATATTGCACCGTTGTTTAAAATTCTTTCAAATCTTCGAAGTGTTTTGGTGCAATGTGATACCGAGTTTCAGCAATCTAAGCAAGTAAAAACTATTCTGGTTGAATATGGTGCAAATATTTCAGAATCAGGAATTTCAAAGTATCACTTGAGGTCTTCTTTCCTTGGTTTTGGAAGATACAATGAACTCTTCAATACTGTGAACGATAGCATATCTAAGGTATTGGTAAGCAGTGAGTCTTGTGATGTTTCTCTCCCGGGTGACAATGATCCTTATTGGTTGGCCCATAAGGGTGAGGGACATTCTGTTTCTTTCACTATACCTGGAGATCGTGAGATAAAGGGAATGGCTTTGTGTGTTGTTTATTTATCAACCTCCAAAATCATTGAACCCAAACTTACTACTGTCTTAATTGTTAATTACACAAAGTGCACGTTACATATGCACAAGCATGACGCAGTAATTTCCTTTAATGATGAAGATTGGCATGGCATAATGTCAAGTTTAGGATCAGGAGACAACGTGGAGATTTTTGTGACTTTTGGTCATGGATTGGTGGTTAACACAGTTGCCTATCTGATATATGGCGAATCAAATGACTTGGAAATGGATTCTTGCCTTGAGCTAAAGGAAAATACCTTAATTAAATTCTTTAAGAAAATGGTAATGTGTGACTTCTGCTGA 2700 0.38 MGDFGKAFKETAHQTFSGQQLEHGMSRWSHALTKAANLFGWDESNHRSDAELVDKIVKSLLSLPVLSATKFPVGLQYQVEDLIGTIKSKSTEDCRIAICGQGGCGKTTLAKAIYNQIHGTFTEKSFIEDIGQFSGIRGDLRLQEQLLSDVLKTKVKISSVEMGKRMIRERLSGKRVFIVLDDVPEFCALLDIWECRRCFSGGTIIIITTRDEHILRIHEVDSVYRITPMSPNESLELLSWYAFREPKPKEEYHFLAKRVVAYCGGLPLALEVIGSYLYERKKKEWDRVILRLDNIPQHEMSHILKISFDGLHSEMEKDLFLDVCCFFVGKSRAYVTKILSGCGVDHDSGIRVLIQRNLIKVKENNKFGMHHLLREMGREIIRRISGKGPEEPGKRSRLWLDEDMEHALSDNTLFSSQETKVIQRLPLKMLLTTKDFFHRYPLVVRDTSRLLRFAENYEYHYTKLRWFSLQGFSSEHLPNDFFLHYAIAIDLKYSLLQFVWNEPQVLAWLKVLNLSHSKYLTKTPDISRLPSLEQLILKDCPELREVHPSIGCLRNLILLNLKDCTSLSNLPRKIYKLKSLKTLILSGCSKIDLLEKDIVQMESLITLIAENTAVKQVPFSIVYSKSIGYISLSGFEGLSHNLFPSIIRSWISPTMDPLSYIHLVYEEDSSWDDIAPLFKILSNLRSVLVQCDTEFQQSKQVKTILVEYGANISESGISKYHLRSSFLGFGRYNELFNTVNDSISKVLVSSESCDVSLPGDNDPYWLAHKGEGHSVSFTIPGDREIKGMALCVVYLSTSKIIEPKLTTVLIVNYTKCTLHMHKHDAVISFNDEDWHGIMSSLGSGDNVEIFVTFGHGLVVNTVAYLIYGESNDLEMDSCLELKENTLIKFFKKMVMCDFC* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00169 899 Gene3D - 229 312 IPR042197 -
Phac10g00169 899 PRINTS Disease resistance protein signature 170 184 - -
Phac10g00169 899 PRINTS Disease resistance protein signature 263 277 - -
Phac10g00169 899 PRINTS Disease resistance protein signature 95 110 - -
Phac10g00169 899 PRINTS Disease resistance protein signature 575 591 - -
Phac10g00169 899 Pfam NB-ARC domain 76 298 IPR002182 GO:0043531
Phac10g00169 899 Gene3D - 60 223 IPR027417 -
Phac10g00169 899 SUPERFAMILY L domain-like 369 686 - -
Phac10g00169 899 Gene3D - 1 59 IPR035897 -
Phac10g00169 899 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 322 IPR027417 -
Phac10g00169 899 Gene3D Ribonuclease Inhibitor 446 735 IPR032675 -
Phac10g00169 899 SMART AAA_5 92 230 IPR003593 GO:0016887
Phac10g00169 899 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 614 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00169 Phac-Chr10 3115277 3119828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00169 96 593 WRKY Transcription Factor Family AT5G45050 29.885 3.96e-58 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00169 - - vun:114165123 1140.18