Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00168 ATGGGAGGATCGGGTAAAACCACCCTTGTAAAAGCCATCTATAATCAAATTCATGGTACATTCACAGAGAAAAGTTTCATTGAAGATATTGGACAATTTAGTGGAATAAGAGGGGATCTTCGTTTACAAGAACAACTTCTTTCAGATGTCCTAAAAACGAAGGTGAAGATAAGCAGTGTTGAGATGGGAAAAAGAATGATTCGGGAAAGACTTTCTGGGAAAAGGGTGTTCATTGTACTTGACGATGTGAATGAGTTTGGTCCATTAGACCTATGGGAAAGTAGTTCATGGTTCGGTGAAGGAACTGTAATAATCATTACAGCGAGAGATGAAGACCTACCGAATACGCTTCGAGTTGATTATGTTTATCCGATGATTATGATGAACGCAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAAAAAGAATACTATTTACTTGCAAAAAGAGTAGTTGCTTATTGTGGATCACTACCTCTAGCTCTTGAAGTCATTGGAACTTATTTATATAAAAGGACGGAAGAAGAATGGATTGGAGTATTGATAAGATTAGACGAGATTCCCCATAATGAAGTTCCACAGATATTGAAAATAAGCTTCGACGGTTTACGTAATCAAATAGAGAAAGATTTATTCCTTGATGTATGTTGTTTCTTTGTTGGTAAAAGGAGAGCCTATGTTACCAAGATCCTAAATGGCTGTGGAGTAGACCATGATAGTGGAATAAGAGTTCTCATAAAGCGTAACCTCATAAAAGTTAAAGAAAACAACAAATTTGGAATGCATCATTTGCTAAGAGAAATGGGAAGAGAAATGATTCGTGAAATTTCAGGAAAGGAATCTGGGAAGAACGGTCGACTGTGGCTTGAGGAGGATCTAAGACATGCATTGTCAGAGAACACTCTCTTTTCATCACCGGGTACAAAAGTCATTCAGAGATTGTCTAGCGGAAGAGATTTCTTTGAACGTTATCCTTTAGAGGTAAGAGACCCATCAAGATTGCTTAAACTCGCTGGAGATTCTGAGTACCCTTCTAAGAAACTGAGATGGATCAGTCTACCAAGGTTTTCTTCAGAATACTTACCTAACGACTTTAATCTGCATGATGCAATAGCGATTGATTTAAAACACACTCTTCTTCGATTCGTCTGGAAAGAACCCCAGGTTTTGGCGTGTCTAAAAGTCCTGAATCTTAGTCACTCCAAGTACTTGACAAAAACCCCTGACTTTTCGAGACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCTAGATTGCAAGAAGTACACCAATCCATTGGATGTCTCTGCAATCTTATACAGCTAAATTTGAAGGACTGTACAAGTCTAAGCACTCTCCCCAGAGAGATATGTAAGTTGAAATCTTTGAAAACTCTCATTATATCTGGTTGTTCGAAAATTGATCTATTGGAAAAAGATATAGTGCAAATGGAATCCTTGAGAACTCTAATTTCTGAAAATACAGATGTGAAACAAGTGCCTTTTTCAATTGTAAGCTCAAAAAGCTTTGGATATTTATTCCTACCTGCATTTGAGGGATTGTCACATAATCTTTTTCCTTTTGTGATTCGGTCTCTGATGTCGCCAACAATGAATGCCTTATCTTATATTCATTCCTTCATGGATATGGAGGATAATAGTTGGGATGATATTTCACCATTGCTTGGCAGCCTTACAAATCTTCGAAGTGTTTTGGTGCAATGTGACGCCAAGTTTAAACTATATCAGCAAGTAAAAACTATATTGGTCGAATATGATGCAAATATTACAGAATCAGGAATTTCAAAGCATAAGTTCAGGTCTTCTCTGACTGGCGTTGGAAGATACAAAGAATTCTTCAATACTGTCAGCGATAGCATACCTAAGGTTCTTCTCTAG 1923 0.376 MGGSGKTTLVKAIYNQIHGTFTEKSFIEDIGQFSGIRGDLRLQEQLLSDVLKTKVKISSVEMGKRMIRERLSGKRVFIVLDDVNEFGPLDLWESSSWFGEGTVIIITARDEDLPNTLRVDYVYPMIMMNANESLELLSWHAFREPKPKKEYYLLAKRVVAYCGSLPLALEVIGTYLYKRTEEEWIGVLIRLDEIPHNEVPQILKISFDGLRNQIEKDLFLDVCCFFVGKRRAYVTKILNGCGVDHDSGIRVLIKRNLIKVKENNKFGMHHLLREMGREMIREISGKESGKNGRLWLEEDLRHALSENTLFSSPGTKVIQRLSSGRDFFERYPLEVRDPSRLLKLAGDSEYPSKKLRWISLPRFSSEYLPNDFNLHDAIAIDLKHTLLRFVWKEPQVLACLKVLNLSHSKYLTKTPDFSRLPSLEQLILKDCPRLQEVHQSIGCLCNLIQLNLKDCTSLSTLPREICKLKSLKTLIISGCSKIDLLEKDIVQMESLRTLISENTDVKQVPFSIVSSKSFGYLFLPAFEGLSHNLFPFVIRSLMSPTMNALSYIHSFMDMEDNSWDDISPLLGSLTNLRSVLVQCDAKFKLYQQVKTILVEYDANITESGISKHKFRSSLTGVGRYKEFFNTVSDSIPKVLL* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00168 640 Gene3D - 127 211 IPR042197 -
Phac10g00168 640 SUPERFAMILY "Winged helix" DNA-binding domain 198 304 IPR036390 -
Phac10g00168 640 SUPERFAMILY L domain-like 332 579 - -
Phac10g00168 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 221 IPR027417 -
Phac10g00168 640 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 502 IPR044974 GO:0006952
Phac10g00168 640 Gene3D Ribonuclease Inhibitor 342 598 IPR032675 -
Phac10g00168 640 Pfam NB-ARC domain 1 193 IPR002182 GO:0043531
Phac10g00168 640 Gene3D - 1 121 IPR027417 -
Phac10g00168 640 PRINTS Disease resistance protein signature 70 84 - -
Phac10g00168 640 PRINTS Disease resistance protein signature 466 482 - -
Phac10g00168 640 PRINTS Disease resistance protein signature 162 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00168 Phac-Chr10 3110791 3114919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00168 1 484 WRKY Transcription Factor Family AT5G45050 29.400 2.04e-50 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00168 - - pvu:PHAVU_010G029600g 867.84