Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00166 ATGGAATTGGCGTCTTCATCATCCAAACTCCCACGGATGTACGATGTGCTCATCAACTTCGATGGACGAGACATCGAAAGGAAATTTGTTTCTCATCTCGATTCTGCCCTCTCTGCTGTTGGCTTCACCACTTTCCTTCACCACCCCTATGCACTCAACCAAACGCACATCAAACAACCTGTTCTCAATCTCTGTCGAGTAGCAATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCGACTTCAACAAATCATTCAATGGCACCAAACTTATTGCCGACATGTTCTGCCCGTTTATTACGAAATTCTGCCATCTGATGTACGTCTTCAGATGGGTGATTTTGGAAAAGCCTTCAAAGCAACTGCACAACAAACATTCTCACCACAACAACTGGAGCATGGCATGTCCAGATGGAGCCACGCACTCACCAAAACTGCAAATTTCTTTGGATGTGATGAGAACAATCACAGGAGTGATGCAGAACTAGTGGACAAAATTGTTAATATCGTTCTTAATTTATCAATCTTGTCTGATACTAAATTTCCAGTTGGATTACAATCCCGTGTGGAGGATGTGATTCGAACCATAAAAAGTAAATCCACCCAAGTTTTTACGATAGCGATATGTGGAATGGGAGGATCGGGTAAAACCACCCTTGTAAAAGCCATCTATAATCAAATTCATGGTACATTCACAGAGAAAAGTTTCATTGAAGATATTGGACAATTTAGTGGAATAAGAGGGGATCTTCGTTTACAAGAACAACTTCTTTCAGATGTCCTAAAAACGAAGGTGAAGATAAGCAGTGTTGAGATGGGAAAAAGAATGATTCGGGAAAGACTTTCTGGGAAAAGGGTGTTCATTGTACTTGACGATGTGAATGAGTTTGGTCCATTAGACCTATGGGAAAGTAGTTCATGGTTCGGTGAAGGAACTGTAATAATCATTACAGCGAGAGATGAAGACCTACCGAATACGCTTCGAGTTGATTATGTTTATCCGATGATTATGATGAACGCAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAAAAAGAATACTATTTACTTGCAAAAAGAGTAGTTGCTTATTGTGGATCACTACCTCTAGCTCTTGAAGTCATTGGAACTTATTTATATAAAAGGACGGAAGAAGAATGGATTGGAGTATTGATAAGATTAGACGAGATTCCCCATAATGAAGTTCCACAGATATTGAAAATAAGCTTCGACGGTTTACGTAATCAAATAGAGAAAGATTTATTCCTTGATGTATGTTGTTTCTTTGTTGGTAAAAGGAGAGCCTATGTTACCAAGATCCTAAATGGCTGTGGAGTAGACCATGATAGTGGAATAAGAGTTCTCATAAAGCGTAACCTCATAAAAGTTAAAGAAAACAACAAATTTGGAATGCATCATTTGCTAAGAGAAATGGGAAGAGAAATGATTCGTGAAATTTCAGGAAAGGAATCTGGGAAGAACGGTCGACTGTGGCTTGAGGAGGATCTAAGACATGCATTGTCAGAGAACACTCTCTTTTCATCACCGGGTACAAAAGTCATTCAGAGATTGTCTAGCGGAAGAGATTTCTTTGAACGTTATCCTTTAGAGGTAAGAGACCCATCAAGATTGCTTAAACTCGCTGGAGATTCTGAGTACCCTTCTAAGAAACTGAGATGGATCAGTCTACCAAGGTTTTCTTCAGAATACTTACCTAACGACTTTAATCTGCATGATGCAATAGCGATTGATTTAAAACACACTCTTCTTCGATTCGTCTGGAAAGAACCCCAGGTTTTGGCGTGTCTAAAAGTCCTGAATCTTAGTCACTCCAAGTACTTGACAAAAACCCCTGACTTTTCGAGACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCTAGATTGCAAGAAGTACACCAATCCATTGGATGTCTCTGCAATCTTATACAGCTAAATTTGAAGGACTGTACAAGTCTAAGCACTCTCCCCAGAGAGATATGTAAGTTGAAATCTTTGAAAACTCTCATTATATCTGGTTGTTCGAAAATTGATCTATTGGAAAAAGATATAGTGCAAATGGAATCCTTGAGAACTCTAATTTCTGAAAATACAGATGTGAAACAAGTGCCTTTTTCAATTGTAAGCTCAAAAAGCTTTGGATATTTATTCCTACCTGCATTTGAGGGATTGTCACATAATCTTTTTCCTTTTGTGATTCGGTCTCTGATGTCGCCAACAATGAATGCCTTATCTTATATTCATTCCTTCATGGATATGGAGGATAATAGTTGGGATGATATTTCACCATTGCTTGGCAGCCTTACAAATCTTCGAAGTGTTTTGGTGCAATGTGACGCCAAGTTTAAACTATATCAGCAAGTAAAAACTATATTGGTCGAATATGATGCAAATATTACAGAATCAGGAATTTCAAAGCATAAGTTCAGGTCTTCTCTGACTGGCGTTGGAAGATACAAAGAATTCTTCAATACTGTCAGCGATAGCATACCTAAGGTTCTTCTCTAG 2568 0.3871 MELASSSSKLPRMYDVLINFDGRDIERKFVSHLDSALSAVGFTTFLHHPYALNQTHIKQPVLNLCRVAIVVFTKTYSQSAWCLHRLQQIIQWHQTYCRHVLPVYYEILPSDVRLQMGDFGKAFKATAQQTFSPQQLEHGMSRWSHALTKTANFFGCDENNHRSDAELVDKIVNIVLNLSILSDTKFPVGLQSRVEDVIRTIKSKSTQVFTIAICGMGGSGKTTLVKAIYNQIHGTFTEKSFIEDIGQFSGIRGDLRLQEQLLSDVLKTKVKISSVEMGKRMIRERLSGKRVFIVLDDVNEFGPLDLWESSSWFGEGTVIIITARDEDLPNTLRVDYVYPMIMMNANESLELLSWHAFREPKPKKEYYLLAKRVVAYCGSLPLALEVIGTYLYKRTEEEWIGVLIRLDEIPHNEVPQILKISFDGLRNQIEKDLFLDVCCFFVGKRRAYVTKILNGCGVDHDSGIRVLIKRNLIKVKENNKFGMHHLLREMGREMIREISGKESGKNGRLWLEEDLRHALSENTLFSSPGTKVIQRLSSGRDFFERYPLEVRDPSRLLKLAGDSEYPSKKLRWISLPRFSSEYLPNDFNLHDAIAIDLKHTLLRFVWKEPQVLACLKVLNLSHSKYLTKTPDFSRLPSLEQLILKDCPRLQEVHQSIGCLCNLIQLNLKDCTSLSTLPREICKLKSLKTLIISGCSKIDLLEKDIVQMESLRTLISENTDVKQVPFSIVSSKSFGYLFLPAFEGLSHNLFPFVIRSLMSPTMNALSYIHSFMDMEDNSWDDISPLLGSLTNLRSVLVQCDAKFKLYQQVKTILVEYDANITESGISKHKFRSSLTGVGRYKEFFNTVSDSIPKVLL* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00166 855 PRINTS Disease resistance protein signature 681 697 - -
Phac10g00166 855 PRINTS Disease resistance protein signature 285 299 - -
Phac10g00166 855 PRINTS Disease resistance protein signature 210 225 - -
Phac10g00166 855 PRINTS Disease resistance protein signature 377 391 - -
Phac10g00166 855 Gene3D - 11 174 IPR035897 -
Phac10g00166 855 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 716 IPR044974 GO:0006952
Phac10g00166 855 SUPERFAMILY "Winged helix" DNA-binding domain 413 519 IPR036390 -
Phac10g00166 855 Gene3D Ribonuclease Inhibitor 549 816 IPR032675 -
Phac10g00166 855 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 436 IPR027417 -
Phac10g00166 855 Pfam TIR domain 14 175 IPR000157 GO:0007165
Phac10g00166 855 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Phac10g00166 855 SMART till_3 13 153 IPR000157 GO:0007165
Phac10g00166 855 Gene3D - 342 426 IPR042197 -
Phac10g00166 855 Gene3D - 175 336 IPR027417 -
Phac10g00166 855 Pfam NB-ARC domain 192 408 IPR002182 GO:0043531
Phac10g00166 855 SUPERFAMILY L domain-like 550 794 - -
Phac10g00166 855 SMART AAA_5 207 347 IPR003593 GO:0016887
Phac10g00166 855 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 155 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00166 Phac-Chr10 3110791 3114919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00166 14 727 WRKY Transcription Factor Family AT4G12020 26.702 6.05e-62 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00166 - - vun:114165123 1152.12