Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00165 ATGGGAGGATCGGGTAAAACCACCCTTGTAAAAGCCATCTATAATCAAATTCATGGTACATTCACAGAGAAAAGTTTCATTGAAGATATTGGACAATTTAGTGGAATAAGAGGGGATCTTCGTTTACAAGAACAACTTCTTTCAGATGTCCTAAAAACGAAGGTGAAGATAAGCAGTGTTGAGATGGGAAAAAGAATGATTCGGGAAAGACTTTCTGGGAAAAGGGTGTTCATTGTACTTGACGATGTGAATGAGTTTGGTCCATTAGACCTATGGGAAAGTAGTTCATGGTTCGGTGAAGGAACTGTAATAATCATTACAGCGAGAGATGAAGACCTACCGAATACGCTTCGAGTTGATTATGTTTATCCGATGATTATGATGAACGCAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAAAAAGAATACTATTTACTTGCAAAAAGAGTAGTTGCTTATTGTGGATCACTACCTCTAGCTCTTGAAGTCATTGGAACTTATTTATATAAAAGGACGGAAGAAGAATGGATTGGAGTATTGATAAGATTAGACGAGATTCCCCATAATGAAGTTCCACAGATATTGAAAATAAGCTTCGACGGTTTACGTAATCAAATAGAGAAAGATTTATTCCTTGATGTATGTTGTTTCTTTGTTGGTAAAAGGAGAGCCTATGTTACCAAGATCCTAAATGGCTGTGGAGTAGACCATGATAGTGGAATAAGAGTTCTCATAAAGCGTAACCTCATAAAAGTTAAAGAAAACAACAAATTTGGAATGCATCATTTGCTAAGAGAAATGGGAAGAGAAATGATTCGTGAAATTTCAGGAAAGGAATCTGGGAAGAACGGTCGACTGTGGCTTGAGGAGGATCTAAGACATGCATTGTCAGAGAACACTCTCTTTTCATCACCGGGTACAAAAGTCATTCAGAGATTGTCTAGCGGAAGAGATTTCTTTGAACGTTATCCTTTAGAGGTAAGAGACCCATCAAGATTGCTTAAACTCGCTGGAGATTCTGAGTACCCTTCTAAGAAACTGAGATGGATCAGTCTACCAAGGTTTTCTTCAGAATACTTACCTAACGACTTTAATCTGCATGATGCAATAGCGATTGATTTAAAACACACTCTTCTTCGATTCGTCTGGAAAGAACCCCAGGTTTTGGCGTGTCTAAAAGTCCTGAATCTTAGTCACTCCAAGTACTTGACAAAAACCCCTGACTTTTCGAGACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCTAGATTGCAAGAAGTACACCAATCCATTGGATGTCTCTGCAATCTTATACAGCTAAATTTGAAGGACTGTACAAGTCTAAGCACTCTCCCCAGAGAGATATGTAAGTTGAAATCTTTGAAAACTCTCATTATATCTGGTTGTTCGAAAATTGATCTATTGGAAAAAGATATAGTGCAAATGGAATCCTTGAGAACTCTAATTTCTGAAAATACAGATGTGAAACAAGTGCCTTTTTCAATTGTAAGCTCAAAAAGCTTTGGATATTTATTCCTACCTGCATTTGAGGGATTGTCACATAATCTTTTTCCTTTTGTGATTCGGTCTCTGATGTCGCCAACAATGAATGCCTTATCTTATATTCATTCCTTCATGGATATGGAGGATAATAGTTGGGATGATATTTCACCATTGCTTGGCAGCCTTACAAATCTTCGAAGTGTTTTGGTGCAATGTGACGCCAAGTTTAAACTATATCAGCAAGTAAAAACTATATTGGTCGAATATGATGCAAATATTACAGAATCAGGAATTTCAAAGCATAAGTTCAGGTCTTCTCTGACTGGCGTTGGAAGATACAAAGAATTCTTCAATACTGTCAGCGATAGCATACCTAAGGTATTTGCAAGCAGTGAGTCATGTGATGTTCCTCTCCCAGGTGACAACGATCCTCATTGGTTGGCCCATATGGGTGATGGACATTCTGTTTCTTTCACTGTGCCTCAAGATCGTGAGGTGAAGGGAATGGCTTTGTGTGTCGTTTATTCATCAACCACCGAAATCATTGAACCGAAATTTACTACTGTCTTAATTGTTAATTACACGAAGTGCACATGCCAGATACACAACCATGGCACAGTAATTTCCTTTAAGGATGAAGATTGGCATGACATAATGTCAAATTTAGGATCAGGAGACAAGGTGGAGATTTTTGTGACTTTTGGTCACGATTTGGTGATTAAGAACACAGCTGTCTACCTGATATATGGTGAGCCAAGGAAAAATTCCCTCATTAGATTCATTAAGAAAATTGTAATGTGA 2334 0.3805 MGGSGKTTLVKAIYNQIHGTFTEKSFIEDIGQFSGIRGDLRLQEQLLSDVLKTKVKISSVEMGKRMIRERLSGKRVFIVLDDVNEFGPLDLWESSSWFGEGTVIIITARDEDLPNTLRVDYVYPMIMMNANESLELLSWHAFREPKPKKEYYLLAKRVVAYCGSLPLALEVIGTYLYKRTEEEWIGVLIRLDEIPHNEVPQILKISFDGLRNQIEKDLFLDVCCFFVGKRRAYVTKILNGCGVDHDSGIRVLIKRNLIKVKENNKFGMHHLLREMGREMIREISGKESGKNGRLWLEEDLRHALSENTLFSSPGTKVIQRLSSGRDFFERYPLEVRDPSRLLKLAGDSEYPSKKLRWISLPRFSSEYLPNDFNLHDAIAIDLKHTLLRFVWKEPQVLACLKVLNLSHSKYLTKTPDFSRLPSLEQLILKDCPRLQEVHQSIGCLCNLIQLNLKDCTSLSTLPREICKLKSLKTLIISGCSKIDLLEKDIVQMESLRTLISENTDVKQVPFSIVSSKSFGYLFLPAFEGLSHNLFPFVIRSLMSPTMNALSYIHSFMDMEDNSWDDISPLLGSLTNLRSVLVQCDAKFKLYQQVKTILVEYDANITESGISKHKFRSSLTGVGRYKEFFNTVSDSIPKVFASSESCDVPLPGDNDPHWLAHMGDGHSVSFTVPQDREVKGMALCVVYSSTTEIIEPKFTTVLIVNYTKCTCQIHNHGTVISFKDEDWHDIMSNLGSGDKVEIFVTFGHDLVIKNTAVYLIYGEPRKNSLIRFIKKIVM* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00165 777 PRINTS Disease resistance protein signature 70 84 - -
Phac10g00165 777 PRINTS Disease resistance protein signature 466 482 - -
Phac10g00165 777 PRINTS Disease resistance protein signature 162 176 - -
Phac10g00165 777 Gene3D - 127 211 IPR042197 -
Phac10g00165 777 SUPERFAMILY "Winged helix" DNA-binding domain 198 304 IPR036390 -
Phac10g00165 777 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 503 IPR044974 GO:0006952
Phac10g00165 777 SUPERFAMILY L domain-like 333 579 - -
Phac10g00165 777 Gene3D - 1 121 IPR027417 -
Phac10g00165 777 Pfam NB-ARC domain 1 193 IPR002182 GO:0043531
Phac10g00165 777 Gene3D Ribonuclease Inhibitor 342 600 IPR032675 -
Phac10g00165 777 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 221 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00165 Phac-Chr10 3110791 3114919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00165 1 484 WRKY Transcription Factor Family AT5G45050 29.400 9.10e-50 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00165 - - pvu:PHAVU_010G029600g 1090.49