Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00152 ATGGAACAGGGTCAATGTTGGACAAAGAGGAAGTACTCTTTGAGCTCTAGTCTTAGTTCACCAACCAACCCTTCCTATGGTGACTCGTGGGAAGAACAAGCTTTTGCAGAAGATGCTGCTAATTCTCTTGGTGGCTGCGTATGGCCTCCAAGATCATACTCTTGTAGCTTTTGCAGAAGAGAGTTTAGGTCAGCACAGGCTCTAGGTGGCCACATGAATGTTCACAGAAGGGATAGAGCAAGACTAAAGCAACAACCCTCTAGCCCCCACAATGAAATTCTATGTCATGACCTTCAAACTCAACTCCATAAGCCACTTCAAAGTCCTTTTGCTTCTTTGGATGATTACCTATACCCTTCTCCTGTTTGTGGATTGGCTTATAAAAAAACTAAACCTAATTCTTATCCTGATTTTGTTGCTTCACCTTCTTCACCCTCACATTCCAAGGCCTTATTGGCTCCATCACTTAATAGTGGTAACTCCAGAGAGGAAACCATGATTCCATTTTATGATTCCACTATTCTCCACAAGATTTCTCCTGTCAGTAATTCTTCCGAAACATGGCCAAATTTAGCTGAAGATCAGGGATTATATTCATGTAAGTTCCATCCTCAAGCTGATACGAAGAAACCCTCCAAGGGAATAATGGATTCTAGATGTTGGGGTAATAAGGGGGATAATGATGATATTGATGGGGATATGAGCCTGAATTCAGTTGTGTATAGTACTCACCCATTTTTGCAGTTTGAGAGTACTAAAGAGGCAGATCATATGAGTTGCATGAAGAGGAAAACAGATGCTTCCTCATCGCCATTTTCCCCAAAGTCAAGCTCAGTTGATAGAAATGATGTGCAGCCAAAGATGCTTGAATTTAGCCCTAGCTCACTGGAAGAGCTAGATCTGGAGTTAAGGCTTGGTTACAGGTCCAAGGTATAG 936 0.4209 MEQGQCWTKRKYSLSSSLSSPTNPSYGDSWEEQAFAEDAANSLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQQPSSPHNEILCHDLQTQLHKPLQSPFASLDDYLYPSPVCGLAYKKTKPNSYPDFVASPSSPSHSKALLAPSLNSGNSREETMIPFYDSTILHKISPVSNSSETWPNLAEDQGLYSCKFHPQADTKKPSKGIMDSRCWGNKGDNDDIDGDMSLNSVVYSTHPFLQFESTKEADHMSCMKRKTDASSSPFSPKSSSVDRNDVQPKMLEFSPSSLEELDLELRLGYRSKV* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00152 311 Pfam C2H2-type zinc finger 53 77 - -
Phac10g00152 311 SUPERFAMILY beta-beta-alpha zinc fingers 50 79 IPR036236 -
Phac10g00152 311 PANTHER OS07G0101800 PROTEIN 25 308 - -
Phac10g00152 311 MobiDBLite consensus disorder prediction 264 283 - -
Phac10g00152 311 MobiDBLite consensus disorder prediction 1 29 - -
Phac10g00152 311 Gene3D Classic Zinc Finger 49 102 - -
Phac10g00152 311 ProSitePatterns Zinc finger C2H2 type domain signature. 55 75 IPR013087 -
Phac10g00152 311 ProSiteProfiles Zinc finger C2H2 type domain profile. 53 80 IPR013087 -
Phac10g00152 311 SMART c2h2final6 53 75 IPR013087 -
Phac10g00152 311 MobiDBLite consensus disorder prediction 258 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00152 Phac-Chr10 2988067 2989871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00152 29 306 C2H2 Transcription Factor Family AT2G37740 32.704 3.52e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac10g00152 zf-C2H2_6 1.3e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00152 - - gmx:100801427 516.924