Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00144 ATGGTTTATGACTGCATGGATAATTTGCTGTGTGATGAGGTGTGGCTTTCGAATAATTCTGAAAATACCTTTGAAGAAGTTGGTGATGACTTTGTTGTTTCACTCAAGAGTTATGATAACAAAGAGTTTGAAGAGGCTTTTACACTGTATCTAGAGAAGGAGGCTTCTTCTTTGCCTGAACACAACTATACAAAGTACTTACACTCCAACAATTTGTTTCTTCCTAGGTGTAGAGTTATTCAATGGCTTGTCAAGTGTGGAAGTCACTTTAATCTTTCTTTTGGAACAGTTTTCTTGGCTGTTAATTATCTTGATCGCTTTGTGTCCATTTGTCAAAGCAATCAGGAATGGAAATACTGGATGCTTGAATTGCTTTCTATTGCCTGCTTATCAGTTGCCATAAAATTCAATGAGAAGTCAGCACTTTCCTTGCATGAAATTCAGGTGGAGGGCTTGAATTACTCATTCCAATCAAGTGTAATTTTGAAAATGGAGCTGATCCTGTTGAAGGCATTGGGGTGGCACCTTAACTCTGTCACAACTTATTCTTTTGTGGAAATGGTGGATTTTCATTTCTTCCAATCTCATCTTTATCACAACCTTATTTCACAACTCCTTCTCCAAGCTACTTTAGATCAGAAAATGCTGGAATTCAGGCCAAGCACTGTTGGCATATCTGCACTGTGGTGCAGTCTAGACCAGTTATATCCACCAACAGCAGATAGTTACATTGCTTATATTCTGAGACTCTTGAGCCAAACTCAGAAGGATGATATCATCAAGTGTCATGAGTTGATGCAAAGACAAGCTTCAGTGTGCTGTGAAAATCACCACCATTGCCCTTTAAGCCCAAGAACAGTACTATTGAACACATCAACTCGCATTTAA 888 0.3863 MVYDCMDNLLCDEVWLSNNSENTFEEVGDDFVVSLKSYDNKEFEEAFTLYLEKEASSLPEHNYTKYLHSNNLFLPRCRVIQWLVKCGSHFNLSFGTVFLAVNYLDRFVSICQSNQEWKYWMLELLSIACLSVAIKFNEKSALSLHEIQVEGLNYSFQSSVILKMELILLKALGWHLNSVTTYSFVEMVDFHFFQSHLYHNLISQLLLQATLDQKMLEFRPSTVGISALWCSLDQLYPPTADSYIAYILRLLSQTQKDDIIKCHELMQRQASVCCENHHHCPLSPRTVLLNTSTRI* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00144 295 SMART cyclin_7 81 170 IPR013763 -
Phac10g00144 295 Pfam Cyclin, C-terminal domain 179 270 IPR004367 -
Phac10g00144 295 SUPERFAMILY Cyclin-like 43 177 IPR036915 -
Phac10g00144 295 Pfam Cyclin, N-terminal domain 46 177 IPR006671 -
Phac10g00144 295 ProSitePatterns Cyclins signature. 76 107 IPR006671 -
Phac10g00144 295 PANTHER CYCLINS 42 268 IPR039361 -
Phac10g00144 295 CDD CYCLIN_AtCycD-like_rpt2 179 266 - -
Phac10g00144 295 Gene3D - 60 177 - -
Phac10g00144 295 Gene3D - 51 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00144 Phac-Chr10 2896225 2899453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00144 45 270 Core Cell Cycle Gene Families AT1G70210 28.870 6.33e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00144 K18813 - gmx:100792420 367.466