Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00134 ATGAAGGAAAGGCAACGTTGGAAAGCTGAAGAGGATGCATTGTTATGTGCTTATGTTAGAGAGTATGGTCCTAGGGAATGGAACCTTGTGTCTCAGCGCATGAACACAACTCTGAACAGGGATGCAAAGTCATGCTTAGAAAGGTGGAAGAACTACCTGAAGCCTGGCATCAAGAAGGGGTCTCTAACAGAGGAAGAGCAGCGCCATGTGATCCGGCTTCAAGCGAAACACGGCAACAAGTGGAAGAAAATTGCTGCAGAAGTTCCAGGTAGAACTGCCAAGAGGTTAGGGAAGTGGTGGGAAGTGTTCAAGGAGAAGCAACAAAGGGAGAAACAAGATAACAAAGCAATTGGCCCAGTTGATAACACCAAATATGATCACATTCTTGAGACTTTTGCTGAGAAGCTAGTGAAAGAACACCCTTCACAATCATCATACCTTATGGCTGCTTCTACTGGACCCTTTATCCATACTGATGCACATGCAACTGTTCCTGCACCTGCACCTGCATCTGCATCTGCATCATCATCAGCAGCAGCAGCATTGCTTCCTCCTTGGCTTTCAAATTCTAGCACCACCAATCCCTCACCAGCAATTATGCCACCTTCCCCTTCTGTGACCCTTAGTCTCTCCTCAACAGCACCTCCTCCCCCTTGGTTGAATGTAACAACACCTCATGGTGATAGCATAGTAGTTTCAGAGTTAATAGACTGCTGTAAGGAGTTGGAAGAAGGGCATCATGCTATGGTGGTGCACAGGAAGGAGGCAGCATGGCTGTTGAGAAGGGTGGAGCTGCAGTTGGAGGCAGAGAAGGGAAACAGAAGGAGGGAAAAGATGGAGGAAATTGAAGCAAAGATTAAGGCTCTGGGGGAAGAAAAGAATGCTGCTTTGGATAGGATAGAAGCAGAATATAGAGAACAGTTAGCAGGGTTGAGGAGAGATGCAGAAAGCAAGGAGAAGAAGTTGGTTGAGGAATGGAATGCAAAGCACATGAGGGTAGTGAAGTGTATGGAACAAGTAGGATGCAGAATATCCAGAATTGCTGAGCCTAATGGAAGATAA 1062 0.4633 MKERQRWKAEEDALLCAYVREYGPREWNLVSQRMNTTLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRHVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKQDNKAIGPVDNTKYDHILETFAEKLVKEHPSQSSYLMAASTGPFIHTDAHATVPAPAPASASASSSAAAALLPPWLSNSSTTNPSPAIMPPSPSVTLSLSSTAPPPPWLNVTTPHGDSIVVSELIDCCKELEEGHHAMVVHRKEAAWLLRRVELQLEAEKGNRRREKMEEIEAKIKALGEEKNAALDRIEAEYREQLAGLRRDAESKEKKLVEEWNAKHMRVVKCMEQVGCRISRIAEPNGR* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00134 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 108 IPR017930 -
Phac10g00134 353 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Phac10g00134 353 CDD SANT 6 53 IPR001005 -
Phac10g00134 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 57 IPR017930 -
Phac10g00134 353 FunFam MYB-related transcription factor 4 58 - -
Phac10g00134 353 Pfam Myb-like DNA-binding domain 7 69 - -
Phac10g00134 353 SMART sant 58 106 IPR001005 -
Phac10g00134 353 SMART sant 3 55 IPR001005 -
Phac10g00134 353 Gene3D - 4 58 - -
Phac10g00134 353 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 348 - -
Phac10g00134 353 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Phac10g00134 353 CDD SANT 63 104 IPR001005 -
Phac10g00134 353 Coils Coil 260 299 - -
Phac10g00134 353 Coils Coil 301 321 - -
Phac10g00134 353 Gene3D - 62 127 - -
Phac10g00134 353 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00134 Phac-Chr10 2244685 2247626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00134 1 346 MYB Transcription Factor Family AT2G37630 57.743 2.18e-140 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac10g00134 Myb_DNA-bind_6 1.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00134 K09422 - zju:107430642 452.981