Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00133 ATGAAGGAGAGGCAACGTTGGAGAGCTGAAGAGGATGCTTTATTACGTTCTTATGTCAAACAGTATGGTCCTAGGGAATGGAATCTTGTGTCTCAGCGCATGAACACAACTCTGAACAGGGATGCAAAGTCATGCTTAGAAAGGTGGAAGAACTACCTGAAGCCTGGCATCAAGAAGGGGTCTCTAACCGAGGAAGAGCAGCGCCTTGTAATCCGGCTTCAAGCGAAACACGGCAACAAGTGGAAGAAAATTGCTGCAGAAGTTCCAGGTAGAACTGCCAAGAGGTTAGGGAAGTGGTGGGAAGTGTTTAAGGAGAAGCAACAAAGAGAGAATAAGGAGCTCAATAGAATCCCTGACCCTATTAACAACAGCAAGTACGAGCACATTCTTGAGAGTTTTGCAGAAAAACTAGTAAAGGAACAACATCCTTCACCATCATTTGTTATGGCTGCTTCTAATGGGACATTTCTGCGTACTGACACACCAGCACCTGCATCAGCCTTGCTTCCTTCTTGGCTTTCCAATTCTAGTAGTGCTGCTGCTGCTGGCCCAAGTTCCCTTTCTGTGACACTAAGTCTTTCTTCCTCAACAGTTGCTGCACCTCCATTCTCATGGTTACAACCTGATAGGGGACCAGACAATGTTCCTTTTGTTTTGGGCAATATACCAGCTTTCAGTGAAAACATGCTGATATCTCAGATGGTGGAGCACTGCAAAGAGTTGGAAGAGGGGCAACGAGCTTTGGGTGCTCACAAGAAGGAGGCAGGGTGGCGGTTAAGCCGGGTGGAGTTGCAGTTGGAGTCAGAGAAGGCGAGCCGAAGAAGGGAGAAGATGGAAGAGTTTGAAGCAAAGATGAAGGCTCTTCAGGAAGAGGAGAGAGCTGCTTTGTGCAGAATTGAAGCAGAATACAGAGAAGAGTTAGCTGCATTGAAGAGAGATGCTGAAAACAAGGAACAAAAGTTAGCAGAACAATGGGCTGCAAAGCATTTGCAGCTTACTAGGTTGCTAGAGCAGATTGGATGCAGAGGAGGGCTGCTTGAGCCAAATGCAAGATGA 1056 0.4678 MKERQRWRAEEDALLRSYVKQYGPREWNLVSQRMNTTLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRENKELNRIPDPINNSKYEHILESFAEKLVKEQHPSPSFVMAASNGTFLRTDTPAPASALLPSWLSNSSSAAAAGPSSLSVTLSLSSSTVAAPPFSWLQPDRGPDNVPFVLGNIPAFSENMLISQMVEHCKELEEGQRALGAHKKEAGWRLSRVELQLESEKASRRREKMEEFEAKMKALQEEERAALCRIEAEYREELAALKRDAENKEQKLAEQWAAKHLQLTRLLEQIGCRGGLLEPNAR* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00133 351 Coils Coil 300 324 - -
Phac10g00133 351 Pfam Myb-like DNA-binding domain 7 67 - -
Phac10g00133 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Phac10g00133 351 SMART sant 3 55 IPR001005 -
Phac10g00133 351 SMART sant 58 106 IPR001005 -
Phac10g00133 351 FunFam MYB-related transcription factor 4 58 - -
Phac10g00133 351 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Phac10g00133 351 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Phac10g00133 351 CDD SANT 6 53 IPR001005 -
Phac10g00133 351 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Phac10g00133 351 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 343 - -
Phac10g00133 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Phac10g00133 351 Coils Coil 271 298 - -
Phac10g00133 351 CDD SANT 63 104 IPR001005 -
Phac10g00133 351 Gene3D - 4 58 - -
Phac10g00133 351 Gene3D - 62 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00133 Phac-Chr10 2241423 2242478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00133 1 342 MYB Transcription Factor Family AT2G37630 62.637 6.69e-144 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac10g00133 Myb_DNA-bind_6 2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00133 K09422 - gmx:100101908 561.607