Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00120 ATGGCACTCTGTGAGGCTGTTGCCATCTCGAGGTTGGTAGTCCAGCATTACAGAGGAATAAAGGATAACAACATCAACAACCTCGTGAAGCATGCTGGGGACGCACTTCGTGAGGCTGCTAGCATCTCAGGGGTTGTAATCCTGAATTCTGGGAATGAAAGCGAGGCTGTGAAAAATATTGTTAAAAATGTTACAAGTTTGTTGGACAAGACAGAGTTGTTTGTTGCCAATAATCCAGTCGGAGTAGAATCTCGAGTGCAAGAAATGGTTCAATTGCTAGAACAAAAACAATCAAACGATGTTCTACTACTTGGGGTATGGGGGATGGGAGGAATTGGTAAAACAACCATTGCAAAAGCAATTTACAATAAGATTGGCCGCAATTTTGAGGCAAGGAGTTTCCTTGCAGATATTAGGGAAGTTTGGGGGCAAGAAGCTGGCCACGTTTGTTTACAAGAACAACTTCTATTTGATATCCACAAAGAAAACAATACAAAGATACATAACATTGAATCAGGAAAAATTATATTAAGAGAAAGACTTCGCCATAAAAGAATACTTCTTATACTTGATGATGTAAATAAATTACAGCAATTAAATGTTTTGTGTGGAAATCGTGAATGGTTTGGTTCAGGGAGTAGAATAATCATCACAACCAGAGATGTACATATACTTAGAGGGAACAGAGTTGACCAAGTGTTCAGTATGAAAGGAATGGATGTAGATGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCAAGTCCCAAAGAAGATTTTATTGAACTTTCAAGAAATGTAGTTGCTTATTCTGGGGGATTGCCACTAGCTCTTGAAGTCCTTGGGTCTTATTTGTTTGATATGGAGGTAACAGAGTGGAAGATTGTATTGGAAAAACTCAGGAAAATTCCTAATGATGAAGTACAGGAGAAGTTAAAAATAAGCTATGATGGTTTAAGTGATGATACAGAGAAAGGAATATTCCTTGATATAGCATGTTTCTTTATAGGGAAGGATCGAAATGATGTTATACATATATTGAATGGTTGTGGACTTTTCCCTGAAAATGGAATTCGTGTCTTGGTAGAGCGAAGCCTTGTAACTGTAGATGATAAGAACCAACTTGGAATGCACGATTTGCTACGGGACATGGGAAGGGAAATTATTCGTTCAAAATCGCCAATGGAGCTTGAGGAGCGTAGCAGGTTATGGTTTCACGACGATGTGCTTGATGTGTTATCAAAAGAAACTGGAACAAAGTTTATTGAGGGATTGACTTTGAAGTTACCAACAAGTAATACAAAATCTCTAAGCACTAAAGCTTTTATGAACATGAAGAAACTCAGGTTGCTGCAACTTTCTGGTGTAGAACTTGTTGGAGATTTTGAATATCTTTCCAAAGACCTTAGATGGCTTTGTTGGCATGGATTTCCTTTAGCCTTCATACCAAAAAGCTTTTATCAAGGAAATATAGTCTCTATTGAGTTAGAAAACAGTAAGATTACAATGATGTGGAAGGAGGCTCAGCTGATGGAGAAGTTGAAAATTCTTAATCTTAGCCATTCTCATTATTTAACAAAGACTCCAGACTTTCTGAATTTGCCTAATCTTGAAAAACTGGTACTAATGGACTGTCCAAGGCTGTCTGAAGTTTCATATACCATTGGTCATCTCACCAAAGTTCTACTAATAAATTTTAAAGATTGTATTGGCCTTCGTAACCTTCCAAGAAGTATCTATAAGTTGAAATCTCTTAAAACACTCATTCTCTCTGGATGTTTAAAGATTGAAGAGTTGGAAGAGAGCTTAGAACAGATGGAGTCTTTGACAACCCTTATTGCAGATAAGACTGGTATTACAAGGGTGCCCTTTTCAATAGTTAGATCAAAAAGTATTGGATATATTTCATTATGTGGTTATGAAGGATTTTCACGCGATGTGTTTCCCTCTATCATTTGGTCTTGGATGTCACCAGTAAATAGTCTCTCTTCCCGTGTTCAGACATTCGTGGACATGTCTTCTCTTGTTTCTTTAGATGTACAAAATAGCAGTTCCAATCAGCTATCATATCTCTCTGAGGAGCTTCCAAAGCTTCAAAGTCTTTGGATTGAGTGTGGCTCAGACCTTCAACTTTCTCGAGATACAACAAGTATTTTGGATGCTTTATATGCGACAATTTCTGAAGAATCGGAGTCATCTGGAACCACATCACAAATGCAGAATGTATTTACATTAATTGAATGCAACTTAAGTTCAAAACGTTTTGAGAAAACACTTTTAATTCAAATGGGAACAAGTTGGGAAATCACACATATTCTGAAACTGAGAATTTTACAGAATATGACTACAAGTGAGGGCGGTGATTGTTTGCTCCCTGGCGACTGTTATCCAGATTGGTTAACCTTCAGCAGCAATGGTTCTTCTGTGACTTTTGAAATCCCTCAAGTGAATGGGCGTAACTTGAAGACAATGATGTGCCATATCCATTATTCTTCCTCTGAAAATATAACTTCAGATGGCCTGAAAAATTTGTTGGTGATAAATCACACAAAGACCACCATTCAGCTGTATAAGAGAAATGCATTAGCGTCGTTTGAAGATGAGGAGTGGCAGAGGGTACTATCAAACATTGAGCCTGGAAACAAGGTGCAAATTGTTGTTGTTTTCTGGAGCGGATTAACTGTTAACAAGACCACAATTTATCTTATATATGAGGGAATTGATGAAAAAGACCATGCACCAAATCTGAATGTTCCCAGTGATGAATCTTCTCCTCGAGTGGAATCCATGGAGGACTTGAGGGGTGTTTCCGTTAAAAGCTTATTGAATAAACTCTTATCATGTACATTCTGTTGTAAAGGAAAATTGGAAAAGAAGAAAAATAAAGGTTAA 2898 0.3747 MALCEAVAISRLVVQHYRGIKDNNINNLVKHAGDALREAASISGVVILNSGNESEAVKNIVKNVTSLLDKTELFVANNPVGVESRVQEMVQLLEQKQSNDVLLLGVWGMGGIGKTTIAKAIYNKIGRNFEARSFLADIREVWGQEAGHVCLQEQLLFDIHKENNTKIHNIESGKIILRERLRHKRILLILDDVNKLQQLNVLCGNREWFGSGSRIIITTRDVHILRGNRVDQVFSMKGMDVDESIELFSWHAFKQASPKEDFIELSRNVVAYSGGLPLALEVLGSYLFDMEVTEWKIVLEKLRKIPNDEVQEKLKISYDGLSDDTEKGIFLDIACFFIGKDRNDVIHILNGCGLFPENGIRVLVERSLVTVDDKNQLGMHDLLRDMGREIIRSKSPMELEERSRLWFHDDVLDVLSKETGTKFIEGLTLKLPTSNTKSLSTKAFMNMKKLRLLQLSGVELVGDFEYLSKDLRWLCWHGFPLAFIPKSFYQGNIVSIELENSKITMMWKEAQLMEKLKILNLSHSHYLTKTPDFLNLPNLEKLVLMDCPRLSEVSYTIGHLTKVLLINFKDCIGLRNLPRSIYKLKSLKTLILSGCLKIEELEESLEQMESLTTLIADKTGITRVPFSIVRSKSIGYISLCGYEGFSRDVFPSIIWSWMSPVNSLSSRVQTFVDMSSLVSLDVQNSSSNQLSYLSEELPKLQSLWIECGSDLQLSRDTTSILDALYATISEESESSGTTSQMQNVFTLIECNLSSKRFEKTLLIQMGTSWEITHILKLRILQNMTTSEGGDCLLPGDCYPDWLTFSSNGSSVTFEIPQVNGRNLKTMMCHIHYSSSENITSDGLKNLLVINHTKTTIQLYKRNALASFEDEEWQRVLSNIEPGNKVQIVVVFWSGLTVNKTTIYLIYEGIDEKDHAPNLNVPSDESSPRVESMEDLRGVSVKSLLNKLLSCTFCCKGKLEKKKNKG* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00120 965 Gene3D Ribonuclease Inhibitor 415 576 IPR032675 -
Phac10g00120 965 PRINTS Disease resistance protein signature 582 598 - -
Phac10g00120 965 PRINTS Disease resistance protein signature 103 118 - -
Phac10g00120 965 PRINTS Disease resistance protein signature 273 287 - -
Phac10g00120 965 PRINTS Disease resistance protein signature 180 194 - -
Phac10g00120 965 Gene3D - 239 322 IPR042197 -
Phac10g00120 965 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 333 IPR027417 -
Phac10g00120 965 Gene3D - 75 232 IPR027417 -
Phac10g00120 965 Gene3D - 10 74 IPR035897 -
Phac10g00120 965 Gene3D Ribonuclease Inhibitor 577 724 IPR032675 -
Phac10g00120 965 Pfam NB-ARC domain 83 310 IPR002182 GO:0043531
Phac10g00120 965 SUPERFAMILY L domain-like 379 707 - -
Phac10g00120 965 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 33 711 IPR044974 GO:0006952
Phac10g00120 965 SMART AAA_5 100 240 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00120 Phac-Chr10 2064428 2069625 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00120 80 630 WRKY Transcription Factor Family AT5G45050 34.423 1.36e-80 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00120 - - var:108322530 1666.36