Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00118 ATGTCTTTCTCAAATGGCGATGATCGATACGACGACAGCAGAAACTTTGAAGTGTTCTTGAGTTTCAGAGGAGAAGACACGCGTGCTTCTTTCACTTCGCATCTCTTTGCCGCTCTTCAGAATGCAGGAATCTTGGTTTTCAAGGATGACGAGTCACTTCCCCGGGAGTCGTGGTGGTGTTTGAAAGAGTTGGAGATAATAATGGAGTGTCACAGAACCATAGGGCATGTGGTGCTACCAGTGTTCTATCACGTTAATCCCTCCGAAGTACGTCATCAAAGAGGGGACTTCGGGGAAGCATTTCGACGCCTTTCGAGCAAGATTTCGAATGACATTGAGGAAAAGGTGCTGGATTGGAAGCAGCAGTGGAGGACCGTACTTGGTGAGACTATTGAGGAAAATGTGCTGGATTGGAAGGGGCGGTGGAGGACGGCACTTGGTGAGACTATTGAGGAAAAGGTGCTGGATCGGAAACCGCGCCGGTGGACGGCTCTTGGTGAGACTGATGGCTTCTATTTGAGGTTTCAATGGGTAAAAAACGTCGTGCTGAATAATTGGAAAGAGGCACTTGCTGAGGCTGCTCAGATCTCGGGGGTTGTAGACTTAGATCCAAGGGGGAAAATGAACATTGCTGAAAAGATAGACTTGCTCGTGCTGCACTGGAAGGAGGGACTTCGTGCGGGTGTTGAAATCCCGATTAGAGAAATGGAGACTGATTATGATATGATAGACTTCCTCTTGAAGCAATGGAGGGAGGTATTTTGTGAGACAGTTAACATCTCAGAGGTTGCCTTCTTAGATCCACGTGGAGAAGCGGAGATTGCTACTGTGATAGAATTCCACGTGAAACATTGTAGGCAGACACTTTTTGAGGCTGCTGGCATCTCTGGGGGCGCCATCTTGAATTCCTGCGGAGAAATGGAGATTACTAATGCGATAGAACTCCACATGAAATATTGGAAGGACGCATTTTCTGAGCAAACTGGTGCAGTCTTAGAATATTCCAATTATTTATGGAGGGAGATATGGAACCTCAAGAAGCATTGGAAGCAGAAACTTCTTCAGGCTTCTGCTATATCAGGGGATAAACAACTCTATTCCAGTGAAAATGAGAGAGAACAGTTGTTGGAGTATTGGAGGAGTACACTTGCCGAGGCTGTTGAAAACTCAACAAAGGCTGTTTACAACTCAACAGGTGCTGTCTTTGTATCCAGAAGTTTAAAAATGCTGAGGGCTTATAATCGTATAGAGAGCCTTCTGAATCATTGGAGTTTGGCACTCTGTGAGGCCGTTGCCATCTCGAGGTTGGTAGTCGAGCATTACAGAGGAATAAAGGATAACGAGATCAACAACCTCGTGAAGCATGCTGGGGACGCACTTTGTGAGGCTGCTGGCATCTCAGGGGTTGTAATCCTGAATTCTGGGAATGAAAGCGAGGCTGTGAAAAATATTGTTAAAAATGTTACAAGTTTGTTGGACAAGACAGAGTTGTTTGTTGCCAATAATCCAGTCGGAGTAGAATCTCGAGTGCAAGAAATGGTTCAATTGCTAGAACAAAAACAATCAAACGATGTTCTCATACTTGGGGTATGGGGGATGGGAGGAATTGGCAAAACAACCATTGCAAAAGCAATTTACAATAAGATTGGCCGCAATTTTGAGGCAAGGAGTTTCCTTGCAGATATTAGGGAAGTTTGGGGTCACGAAGCTGGCCACGTTTGTTTACAAGAACAACTTCTGTTTGATATCCACAAAGAAAACAATACAAAGATACATAACATTGAATCAGGAAAAGTTATATTAAGAGAAAGACTTCGCCATAAAAGGATACTTCTTATACTTGATGATGTAGATAAATTAGAGCAATTAAATGTTTTGTGTGGAAATCGTGAATGGTTTGGTTCAGGGAGTAGAATAATCATCACAACCAGAGACGTACATTTACTTAGAGGGAAAAGAGTTGACCAAGTGTTCACTATGAAAGGAATGGATGTAGATGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGAAAGCAAGTCCCAAAGAAGATTTTATTGAACTTTCAAGAAATGTAGTTGCTTATTCTGGGGGATTGCCACTAGCTCTTGAAGTCCTTGGGTCTTATTTGTTTGATATGGAGGTAACAGAGTGGAAGATTGTATTGGAAAAACTCAGGAAAGTTCCTAATGATGAAGTACAGGAGAAGCTAAAAATAAGCTATGATGGTTTAAGTGATGATACAGAGAAAGGAATATTCCTTGATATTGCATGTTTCTTTATAGGGAAGGATCGAAATGATGTTATACATATATTGAATGGTTGTGGACTTTTCCCAGAAAATGGAATTCGTGTCTTGGTAGAGCGAAGCCTTGTAACTGTAGATGATAAGAACCAACTTGGAATGCATGATTTGCTACGGGACATGGGAAGGGAAATTATTCGTTCAAAATCACCAATGTGGCTTGAGGAGCGTAGCAGGTTATGGTTTCACGACGATGTGCTTGATGTATTATCAAAAGAAACTGGAACAAAGTTTATTGAGGGATTGACTTTGAAGTTACCAACAAGTAATACAAAATTTCTAAGCACTAAAGCTTTTATGAACATGAAGAAACTCAGGTTGGTGGATCTTTCTGGTGTAGAACTTGTTGGAGATTTTGTATATCTTTCCAAAGACCTTAGGTGGCTTTGTTGGCATGGATTTCCTTTAGCCTCCATTCCAAAAAGCTTTTATCAAGGAAATATAGTCTCGATTGAGTTAGAAAACAGTAAGATTACAATGATGTGGAAGGAGGCTCAGCTTATGGAGAAGTTAAAAATTCTTAATCTTAGCCATTCTCATTATTTAAGAAAGACTCCAGACTTTCTGAATTTGCCTAATCTTGAAAAGCTGGTACTCATCGATTGTCCAAGGCTGTCTGAAGTTTCATATACCATTGGTCATCTCACCAAAGTTCTACTAATAAATTTTCAAGATTGTATTGGCCTTCGTAACCTTCCAAGAAGTATCTATAAGTTGAAATCTCTTAAAACACTCATTCTCTCTGGATGTTTAAAGATTGAAGAGTTGGAAGAGAGCTTAGAACAGATGGAGTCTTTGACAACCCTTATTGCAGATAAGACTGGTATTACAAGGGTGCCCTTTTCAATAGTTAGATCAAAAAGTATTGGATATATTTCATTATGTGGTTATGAAGGATTTTCACGCGATGTGTTTCCCTCTATCATTTGGTCTTGGATGTCACCAGTAAATAGTCTCTCTTCCCGTGTTCAGACATTCGTGGACATGTCTTCTCTTGTTTCTCTAGATGTACAAAATAGCAGTTCCAATCAGCTATCAGATATCTCTAAGGAACTTCCAAAGCTTCAAAGTCTTTGGATTGAGTGTGGCTCAGACCTTCAACTTTCTCGAGATACATCAAGTATTTTGGATGCTTTATATGCAACAAATTCTGAAGAATCGGAGTCATCTGGAACCACATCACAAATGCAGAATGTATTTACATTAATTGAATGCAACTCAAGTTCTAAACGTTTTGAGAAAACACTTTTAATTCAAATGGGAACGAGTTGGGAAATCACACGTATTCTGAAACAGAGAATTTTACAGAATAGGACTACAAGTGATGGCAGTGATTGTTTGCTCCCTGGCGATTGTTATCCAGATTGGTTAACCTTCAGCAGCAAAGGTTCTTCTGTGACTTTTGAAATCCCTAAAGTGAATGGGCGTAACTTGAAGACAATGATGTGCCATACCCATTATTCTTCCTCTGAAAATATAACTTCAGATGGCCTGAAAAATTTGTTGGTGATAAATCACACAAAGACCACCATTCAGCTTTATAAGAGAAATGCATTAGCGTCGTTTGAAGATGAGGAGTGGCAGAGGGTACTATCAAACATTGAGCCTGGAAACAAGGTGCAAATTGTTGTTATTTTCTGGAGCGGGTTAACTGTTAACAAGACCACAATTTATCTTATATATGAGGGAATTGATGAAGAAGACCATGCACCAAATCTGAATGTTCCCAGGGATGAATCTTCTCCTCGAGTGGAATCCATGGAGGACATGAGGGGTGTTAAAGTTGTTTATTATGGATGCAAACCTTGTATCGGTGCTACTTTTTGCCATGCCCTGCTCTGCACAGGACCTTGA 4161 0.4057 MSFSNGDDRYDDSRNFEVFLSFRGEDTRASFTSHLFAALQNAGILVFKDDESLPRESWWCLKELEIIMECHRTIGHVVLPVFYHVNPSEVRHQRGDFGEAFRRLSSKISNDIEEKVLDWKQQWRTVLGETIEENVLDWKGRWRTALGETIEEKVLDRKPRRWTALGETDGFYLRFQWVKNVVLNNWKEALAEAAQISGVVDLDPRGKMNIAEKIDLLVLHWKEGLRAGVEIPIREMETDYDMIDFLLKQWREVFCETVNISEVAFLDPRGEAEIATVIEFHVKHCRQTLFEAAGISGGAILNSCGEMEITNAIELHMKYWKDAFSEQTGAVLEYSNYLWREIWNLKKHWKQKLLQASAISGDKQLYSSENEREQLLEYWRSTLAEAVENSTKAVYNSTGAVFVSRSLKMLRAYNRIESLLNHWSLALCEAVAISRLVVEHYRGIKDNEINNLVKHAGDALCEAAGISGVVILNSGNESEAVKNIVKNVTSLLDKTELFVANNPVGVESRVQEMVQLLEQKQSNDVLILGVWGMGGIGKTTIAKAIYNKIGRNFEARSFLADIREVWGHEAGHVCLQEQLLFDIHKENNTKIHNIESGKVILRERLRHKRILLILDDVDKLEQLNVLCGNREWFGSGSRIIITTRDVHLLRGKRVDQVFTMKGMDVDESIELFSWHAFKKASPKEDFIELSRNVVAYSGGLPLALEVLGSYLFDMEVTEWKIVLEKLRKVPNDEVQEKLKISYDGLSDDTEKGIFLDIACFFIGKDRNDVIHILNGCGLFPENGIRVLVERSLVTVDDKNQLGMHDLLRDMGREIIRSKSPMWLEERSRLWFHDDVLDVLSKETGTKFIEGLTLKLPTSNTKFLSTKAFMNMKKLRLVDLSGVELVGDFVYLSKDLRWLCWHGFPLASIPKSFYQGNIVSIELENSKITMMWKEAQLMEKLKILNLSHSHYLRKTPDFLNLPNLEKLVLIDCPRLSEVSYTIGHLTKVLLINFQDCIGLRNLPRSIYKLKSLKTLILSGCLKIEELEESLEQMESLTTLIADKTGITRVPFSIVRSKSIGYISLCGYEGFSRDVFPSIIWSWMSPVNSLSSRVQTFVDMSSLVSLDVQNSSSNQLSDISKELPKLQSLWIECGSDLQLSRDTSSILDALYATNSEESESSGTTSQMQNVFTLIECNSSSKRFEKTLLIQMGTSWEITRILKQRILQNRTTSDGSDCLLPGDCYPDWLTFSSKGSSVTFEIPKVNGRNLKTMMCHTHYSSSENITSDGLKNLLVINHTKTTIQLYKRNALASFEDEEWQRVLSNIEPGNKVQIVVIFWSGLTVNKTTIYLIYEGIDEEDHAPNLNVPRDESSPRVESMEDMRGVKVVYYGCKPCIGATFCHALLCTGP* 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00118 1386 Gene3D - 11 55 IPR035897 -
Phac10g00118 1386 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 129 IPR035897 -
Phac10g00118 1386 Gene3D - 663 746 IPR042197 -
Phac10g00118 1386 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 215 IPR044974 GO:0006952
Phac10g00118 1386 Pfam TIR domain 16 53 IPR000157 GO:0007165
Phac10g00118 1386 Pfam TIR domain 57 125 IPR000157 GO:0007165
Phac10g00118 1386 PRINTS Disease resistance protein signature 697 711 - -
Phac10g00118 1386 PRINTS Disease resistance protein signature 527 542 - -
Phac10g00118 1386 PRINTS Disease resistance protein signature 1006 1022 - -
Phac10g00118 1386 PRINTS Disease resistance protein signature 604 618 - -
Phac10g00118 1386 SUPERFAMILY L domain-like 803 1130 - -
Phac10g00118 1386 ProSiteProfiles TIR domain profile. 1 116 IPR000157 GO:0007165
Phac10g00118 1386 SMART AAA_5 524 664 IPR003593 GO:0016887
Phac10g00118 1386 Pfam NB-ARC domain 507 735 IPR002182 GO:0043531
Phac10g00118 1386 Gene3D Ribonuclease Inhibitor 1000 1148 IPR032675 -
Phac10g00118 1386 SMART till_3 15 129 IPR000157 GO:0007165
Phac10g00118 1386 Gene3D - 484 656 IPR027417 -
Phac10g00118 1386 Gene3D - 56 220 IPR035897 -
Phac10g00118 1386 Gene3D Ribonuclease Inhibitor 839 999 IPR032675 -
Phac10g00118 1386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 491 757 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00118 Phac-Chr10 2044250 2056716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00118 728 819 WRKY Transcription Factor Family AT5G45050 35.484 6.34e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00118 - - var:108322530 2025.75