Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00117 ATGTCTTTCTCAAATGGCGATGATCGATACGACGACAGCAGAAACTTTGAAGTGTTCTTGAGTTTCAGAGGAGAAGACACGCGTGCTTCTTTCACTTCGCATCTCTTTGCCGCTCTTCAGAATGCAGGAATCTTGGTTTTCAAGGATGACGAGTCACTTCCCCGGGGTAGGCAAATTTCACCCTCTCTGAACCTGGCAATCGAACAGTCTCGAATTTCTGTTGTTGTTTTCTCCAAAAATTATGCAGAGTCGTGGTGGTGTTTGAAAGAGTTGGAGATAATAATGGAGTGTCACAGAACCATAGGGCATGTGGTGCTACCAGTGTTCTATCACGTTAATCCCTCCGAAGTACGTCATCAAAGAGGGGACTTCGGGGAAGCATTTCGACGCCTTTCGAGCAAGATTTCGAATGACATTGAGGAAAAGGTGCTGGATTGGAAGCAGCAGTGGAGGACCGTACTTGGTGAGACTATTGAGGAAAATGTGCTGGATTGGAAGGGGCGGTGGAGGACGGCACTTGGTGAGACTATTGAGGAAAAGGTGCTGGATCGGAAACCGCGCCGGTGGACGGCTCTTGGTGAGACTGATGGCTTCTATTTGAGGTTTCAATGGGTAAAAAACGTCGTGCTGAATAATTGGAAAGAGGCACTTGCTGAGGCTGCTCAGATCTCGGGGGTTGTAGACTTAGATCCAAGGGGGAAAATGAACATTGCTGAAAAGATAGACTTGCTCGTGCTGCACTGGAAGGAGGGACTTCGTGCGGGTGTTGAAATCCCGATTAGAGAAATGGAGACTGATTATGATATGATAGACTTCCTCTTGAAGCAATGGAGGGAGGTATTTTGTGAGACAGTTAACATCTCAGAGGTTGCCTTCTTAGATCCACGTGGAGAAGCGGAGATTGCTACTGTGATAGAATTCCACGTGAAACATTGTAGGCAGACACTTTTTGAGGCTGCTGGCATCTCTGGGGGCGCCATCTTGAATTCCTGCGGAGAAATGGAGATTACTAATGCGATAGAACTCCACATGAAATATTGGAAGGACGCATTTTCTGAGCAAACTGGTGCAGTCTTAGAATATTCCAATTATTTATGGAGGGAGATATGGAACCTCAAGAAGCATTGGAAGCAGAAACTTCTTCAGGCTTCTGCTATATCAGGGGATAAACAACTCTATTCCAGTGAAAATGAGAGAGAACAGTTGTTGGAGTATTGGAGGAGTACACTTGCCGAGGCTGTTGAAAACTCAACAAAGGCTGTTTACAACTCAACAGGTGCTGTCTTTGTATCCAGAAGTTTAAAAATGCTGAGGGCTTATAATCGTATAGAGAGCCTTCTGAATCATTGGAGTTTGGCACTCTGTGAGGCCGTTGCCATCTCGAGGTTGGTAGTCGAGCATTACAGAGGAATAAAGGATAACGAGATCAACAACCTCGTGAAGCATGCTGGGGACGCACTTTGTGAGGCTGCTGGCATCTCAGGGGTTGTAATCCTGAATTCTGGGAATGAAAGCGAGGCTGTGAAAAATATTGTTAAAAATGTTACAAGTTTGTTGGACAAGACAGAGTTGTTTGTTGCCAATAATCCAGTCGGAGTAGAATCTCGAGTGCAAGAAATGGTTCAATTGCTAGAACAAAAACAATCAAACGATGTTCTCATACTTGGGGTATGGGGGATGGGAGGAATTGGCAAAACAACCATTGCAAAAGCAATTTACAATAAGATTGGCCGCAATTTTGAGGCAAGGAGTTTCCTTGCAGATATTAGGGAAGTTTGGGGTCACGAAGCTGGCCACGTTTGTTTACAAGAACAACTTCTGTTTGATATCCACAAAGAAAACAATACAAAGATACATAACATTGAATCAGGAAAAGTTATATTAAGAGAAAGACTTCGCCATAAAAGGATACTTCTTATACTTGATGATGTAGATAAATTAGAGCAATTAAATGTTTTGTGTGGAAATCGTGAATGGTTTGGTTCAGGGAGTAGAATAATCATCACAACCAGAGACGTACATTTACTTAGAGGGAAAAGAGTTGACCAAGTGTTCACTATGAAAGGAATGGATGTAGATGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGAAAGCAAGTCCCAAAGAAGATTTTATTGAACTTTCAAGAAATGTAGTTGCTTATTCTGGGGGATTGCCACTAGCTCTTGAAGTCCTTGGGTCTTATTTGTTTGATATGGAGGTAACAGAGTGGAAGATTGTATTGGAAAAACTCAGGAAAGTTCCTAATGATGAAGTACAGGAGAAGCTAAAAATAAGCTATGATGGTTTAAGTGATGATACAGAGAAAGGAATATTCCTTGATATTGCATGTTTCTTTATAGGGAAGGATCGAAATGATGTTATACATATATTGAATGGTTGTGGACTTTTCCCAGAAAATGGAATTCGTGTCTTGGTAGAGCGAAGCCTTGTAACTGTAGATGATAAGAACCAACTTGGAATGCATGATTTGCTACGGGACATGGGAAGGGAAATTATTCGTTCAAAATCACCAATGTGGCTTGAGGAGCGTAGCAGGTTATGGTTTCACGACGATGTGCTTGATGTATTATCAAAAGAAACTGGAACAAAGTTTATTGAGGGATTGACTTTGAAGTTACCAACAAGTAATACAAAATTTCTAAGCACTAAAGCTTTTATGAACATGAAGAAACTCAGGTTGGTGGATCTTTCTGGTGTAGAACTTGTTGGAGATTTTGTATATCTTTCCAAAGACCTTAGGTGGCTTTGTTGGCATGGATTTCCTTTAGCCTCCATTCCAAAAAGCTTTTATCAAGGAAATATAGTCTCGATTGAGTTAGAAAACAGTAAGATTACAATGATGTGGAAGGAGGCTCAGCTTATGGAGAAGTTAAAAATTCTTAATCTTAGCCATTCTCATTATTTAAGAAAGACTCCAGACTTTCTGAATTTGCCTAATCTTGAAAAGCTGGTACTCATCGATTGTCCAAGGCTGTCTGAAGTTTCATATACCATTGGTCATCTCACCAAAGTTCTACTAATAAATTTTCAAGATTGTATTGGCCTTCGTAACCTTCCAAGAAGTATCTATAAGTTGAAATCTCTTAAAACACTCATTCTCTCTGGATGTTTAAAGATTGAAGAGTTGGAAGAGAGCTTAGAACAGATGGAGTCTTTGACAACCCTTATTGCAGATAAGACTGGTATTACAAGGGTGCCCTTTTCAATAGTTAGATCAAAAAGTATTGGATATATTTCATTATGTGGTTATGAAGGATTTTCACGCGATGTGTTTCCCTCTATCATTTGGTCTTGGATGTCACCAGTAAATAGTCTCTCTTCCCGTGTTCAGACATTCGTGGACATGTCTTCTCTTGTTTCTCTAGATGTACAAAATAGCAGTTCCAATCAGCTATCAGATATCTCTAAGGAACTTCCAAAGCTTCAAAGTCTTTGGATTGAGTGTGGCTCAGACCTTCAACTTTCTCGAGATACATCAAGTATTTTGGATGCTTTATATGCAACAAATTCTGAAGAATCGGAGTCATCTGGAACCACATCACAAATGCAGAATGTATTTACATTAATTGAATGCAACTCAAGTTCTAAACGTTTTGAGAAAACACTTTTAATTCAAATGGGAACGAGTTGGGAAATCACACGTATTCTGAAACAGAGAATTTTACAGAATAGGACTACAAGTGATGGCAGTGATTGTTTGCTCCCTGGCGATTGTTATCCAGATTGGTTAACCTTCAGCAGCAAAGGTTCTTCTGTGACTTTTGAAATCCCTAAAGTGAATGGGCGTAACTTGAAGACAATGATGTGCCATACCCATTATTCTTCCTCTGAAAATATAACTTCAGATGGCCTGAAAAATTTGTTGGTGATAAATCACACAAAGACCACCATTCAGCTTTATAAGAGAAATGCATTAGCGTCGTTTGAAGATGAGGAGTGGCAGAGGGTACTATCAAACATTGAGCCTGGAAACAAGGTGCAAATTGTTGTTATTTTCTGGAGCGGGTTAACTGTTAACAAGACCACAATTTATCTTATATATGAGGGAATTGATGAAGAAGACCATGCACCAAATCTGAATGTTCCCAGGGATGAATCTTCTCCTCGAGTGGAATCCATGGAGGACATGAGGGGTGTTAAAGTTGTTTATTATGGATGCAAACCTTGTATCGGTGCTACTTTTTGCCATGCCCTGCTCTGCACAGGACCTTGA 4242 0.4057 MSFSNGDDRYDDSRNFEVFLSFRGEDTRASFTSHLFAALQNAGILVFKDDESLPRGRQISPSLNLAIEQSRISVVVFSKNYAESWWCLKELEIIMECHRTIGHVVLPVFYHVNPSEVRHQRGDFGEAFRRLSSKISNDIEEKVLDWKQQWRTVLGETIEENVLDWKGRWRTALGETIEEKVLDRKPRRWTALGETDGFYLRFQWVKNVVLNNWKEALAEAAQISGVVDLDPRGKMNIAEKIDLLVLHWKEGLRAGVEIPIREMETDYDMIDFLLKQWREVFCETVNISEVAFLDPRGEAEIATVIEFHVKHCRQTLFEAAGISGGAILNSCGEMEITNAIELHMKYWKDAFSEQTGAVLEYSNYLWREIWNLKKHWKQKLLQASAISGDKQLYSSENEREQLLEYWRSTLAEAVENSTKAVYNSTGAVFVSRSLKMLRAYNRIESLLNHWSLALCEAVAISRLVVEHYRGIKDNEINNLVKHAGDALCEAAGISGVVILNSGNESEAVKNIVKNVTSLLDKTELFVANNPVGVESRVQEMVQLLEQKQSNDVLILGVWGMGGIGKTTIAKAIYNKIGRNFEARSFLADIREVWGHEAGHVCLQEQLLFDIHKENNTKIHNIESGKVILRERLRHKRILLILDDVDKLEQLNVLCGNREWFGSGSRIIITTRDVHLLRGKRVDQVFTMKGMDVDESIELFSWHAFKKASPKEDFIELSRNVVAYSGGLPLALEVLGSYLFDMEVTEWKIVLEKLRKVPNDEVQEKLKISYDGLSDDTEKGIFLDIACFFIGKDRNDVIHILNGCGLFPENGIRVLVERSLVTVDDKNQLGMHDLLRDMGREIIRSKSPMWLEERSRLWFHDDVLDVLSKETGTKFIEGLTLKLPTSNTKFLSTKAFMNMKKLRLVDLSGVELVGDFVYLSKDLRWLCWHGFPLASIPKSFYQGNIVSIELENSKITMMWKEAQLMEKLKILNLSHSHYLRKTPDFLNLPNLEKLVLIDCPRLSEVSYTIGHLTKVLLINFQDCIGLRNLPRSIYKLKSLKTLILSGCLKIEELEESLEQMESLTTLIADKTGITRVPFSIVRSKSIGYISLCGYEGFSRDVFPSIIWSWMSPVNSLSSRVQTFVDMSSLVSLDVQNSSSNQLSDISKELPKLQSLWIECGSDLQLSRDTSSILDALYATNSEESESSGTTSQMQNVFTLIECNSSSKRFEKTLLIQMGTSWEITRILKQRILQNRTTSDGSDCLLPGDCYPDWLTFSSKGSSVTFEIPKVNGRNLKTMMCHTHYSSSENITSDGLKNLLVINHTKTTIQLYKRNALASFEDEEWQRVLSNIEPGNKVQIVVIFWSGLTVNKTTIYLIYEGIDEEDHAPNLNVPRDESSPRVESMEDMRGVKVVYYGCKPCIGATFCHALLCTGP* 1414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00117 1413 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 1181 IPR044974 GO:0006952
Phac10g00117 1413 Gene3D - 511 683 IPR027417 -
Phac10g00117 1413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 518 784 IPR027417 -
Phac10g00117 1413 Gene3D Ribonuclease Inhibitor 1027 1175 IPR032675 -
Phac10g00117 1413 Pfam TIR domain 16 152 IPR000157 GO:0007165
Phac10g00117 1413 Gene3D Ribonuclease Inhibitor 866 1026 IPR032675 -
Phac10g00117 1413 ProSiteProfiles TIR domain profile. 14 143 IPR000157 GO:0007165
Phac10g00117 1413 Gene3D - 690 773 IPR042197 -
Phac10g00117 1413 SMART AAA_5 551 691 IPR003593 GO:0016887
Phac10g00117 1413 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 156 IPR035897 -
Phac10g00117 1413 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 185 - -
Phac10g00117 1413 Gene3D - 10 250 IPR035897 -
Phac10g00117 1413 Pfam NB-ARC domain 534 762 IPR002182 GO:0043531
Phac10g00117 1413 PRINTS Disease resistance protein signature 724 738 - -
Phac10g00117 1413 PRINTS Disease resistance protein signature 1033 1049 - -
Phac10g00117 1413 PRINTS Disease resistance protein signature 631 645 - -
Phac10g00117 1413 PRINTS Disease resistance protein signature 554 569 - -
Phac10g00117 1413 SUPERFAMILY L domain-like 830 1157 - -
Phac10g00117 1413 SMART till_3 15 156 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00117 Phac-Chr10 2044250 2056716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00117 755 846 WRKY Transcription Factor Family AT5G45050 35.484 6.99e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00117 - - var:108322530 2084.69