Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00111 ATGGCACCCAACCCTTTCAAATTCAATGAGGATATTCTCGAGCAACTCAGAAGTGGGACTGCGAAATTCGAGCTTGTTTCTTCCCCGGTTCCTTCAGTTGCTGCTCCTCCGAACAACAACACAAGCTTGTTTGGATTTGGGAATCGTAGCACTCTCTTTTTCGCCAGAATTGGCTCCTCCTCTAGTGGATACTCTCCCGCAATGAAGAAACTTGAGCGTTTCTCAATTCAGAAGGTTACAGGGGATGGGCGATGTCTGTTTCGTGCACTGGTCAAAGGAATGGCTTACAATAAGGGAACTGTTCTCAATCAACGTGAGGAGAGAGAAAATGCAGATGAATTAAGAATGGCTGTGAAAGAAGCTATATGTGAAAATGAGGCTGAACGTAATTTATATGAAGAAGCCCTCATTGCCATCACAGTTGATGAACCTCTAAATCGTTACTGCCAACGGATTGTACGACCTGATTTCTGGGGAGGAGAATCAGAGCTATTGGTACTTTCAAAGTTATGTAACCAGCCAATCATTGTGTACATACCAGAGCATGAGGTATAA 555 0.4378 MAPNPFKFNEDILEQLRSGTAKFELVSSPVPSVAAPPNNNTSLFGFGNRSTLFFARIGSSSSGYSPAMKKLERFSIQKVTGDGRCLFRALVKGMAYNKGTVLNQREERENADELRMAVKEAICENEAERNLYEEALIAITVDEPLNRYCQRIVRPDFWGGESELLVLSKLCNQPIIVYIPEHEV* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00111 184 ProSiteProfiles OTU domain profile. 74 184 IPR003323 -
Phac10g00111 184 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 49 183 - -
Phac10g00111 184 FunFam Cysteine proteinases superfamily protein 53 184 - -
Phac10g00111 184 Pfam OTU-like cysteine protease 80 178 IPR003323 -
Phac10g00111 184 Coils Coil 104 124 - -
Phac10g00111 184 Gene3D - 49 184 - -
Phac10g00111 184 SUPERFAMILY Cysteine proteinases 74 179 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00111 Phac-Chr10 1970340 1975360 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00111 79 178 C2H2 Transcription Factor Family AT1G50670 30.000 7.48e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00111 - - vun:114166084 323.553