Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00054 ATGCCTTCCTCTTCCACCACCATAGTCTCCAGATGCCTTATCCATCCCGACCACAAATCCAGCATGAAACCACTCAAACTCTCTGTTTCTGACCTTCCAATGTTGTCGTGTCATTACATCCAAAAGGGGGTCTTGCTCACTGCCCCACCATCTTCCTTCGAAGACCTCATTCTCTCTCTCAAACACTCTCTCTCCGCCGCTCTCTCCCACTTCCCCGCCATCGCCGGCCGTCTCTCCACCGACTCCCAGGGTTACGTCCACATCGTCTGCAACGACGCCGGCGTCGACTTCATCCACGCCAAGGCCAAGCACTTAACTCTAAACGCCGTCGTTTCCCCCTTGTCCGTTGATGTTCACCCATGCTTCAAGGAATTCTTCGCCTACGACATGATGATCTCCTACGCCGGCCACAACAACCCCCTCGCGGCCGTCCAGGTCACCGAGCTTGCCGACGCCGTCTTTGTCGGCTGCACCGTCAACCACGCCGTCACCGACGGGACCTCCTTCTGGCACTTCTTCAACACCTTTGCCGCCATCACCAAAGGTAGTGCCGCCAAGAAAGTACTCCGCGCGCCGGACTTCACGCGCGAAACCGTAATCAACTCCCCCGCCGTCCTCTTCGTCCCCGCCGGCGGCCCCGCCCTCACCTTTGACGCCAACAAACCCATCCGCGAACGCGTCTTCCACTTCTCCCGCGAATCTATTCAGAAACTCAAACTTAGAGCCAACGCCAATACCAACGAACTAACGGAAGTAATGGGAAAACAAGTGAATGACGGTTGGAAAATCGTTAACGGTAACGGAAACGGAAACGGAAAGCTTAACGGTAACGGAAGAAACGAGATCTCGTCGTTTCAGTCGTTATCTGCTCAGCTCTGGCGTTCGGTGACACGTGCGAGGAAATTCAACGATCCTGCCAAAACGTCAACGTTTCGGATGGCGGTTAATTTCCGCCACCGCTTGGAGCCGAAGATGGACGCGTTTTACTTCGGCAATGCGATTCAGAGCATTCCAACCGTCGCAACCGTCGGGGATATTCTCTCGCGCGATCTGCGTTTCTGCGCGGATTTGCTGCATCGAAACGTGATCGCGCACGATGACGCTACGGTGCGCCGCGGCATAGAGGATTGGGAGAACGCGCCGCGGCTGTTTCCTCTCGGGAACTTCGACGGCGCGATGATCACCATGGGAAGCTCCCCGCGTTTTCCCATGTACGACAACGACTTCGGCTGGGGCAGGCCCGTCGCGATTCGGAGTGGCAAAGCGAACAAGTTCGACGGTAAAATCTCCGCTTTTCCGGGGAGAGAAGGAAACGGCAGCGTGGATCTGGAAGTCGTTTTGGCTCCGGAGACCATGGCGGGGCTCGAAAACGACATGGAGTTTATGCAATACGTAACGCAGGTGGTGTGA 1410 0.5617 MPSSSTTIVSRCLIHPDHKSSMKPLKLSVSDLPMLSCHYIQKGVLLTAPPSSFEDLILSLKHSLSAALSHFPAIAGRLSTDSQGYVHIVCNDAGVDFIHAKAKHLTLNAVVSPLSVDVHPCFKEFFAYDMMISYAGHNNPLAAVQVTELADAVFVGCTVNHAVTDGTSFWHFFNTFAAITKGSAAKKVLRAPDFTRETVINSPAVLFVPAGGPALTFDANKPIRERVFHFSRESIQKLKLRANANTNELTEVMGKQVNDGWKIVNGNGNGNGKLNGNGRNEISSFQSLSAQLWRSVTRARKFNDPAKTSTFRMAVNFRHRLEPKMDAFYFGNAIQSIPTVATVGDILSRDLRFCADLLHRNVIAHDDATVRRGIEDWENAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPVAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDMEFMQYVTQVV* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00054 469 Pfam Transferase family 7 462 - -
Phac10g00054 469 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 463 - -
Phac10g00054 469 Gene3D - 221 462 IPR023213 -
Phac10g00054 469 Gene3D - 6 207 IPR023213 -
Phac10g00054 469 SUPERFAMILY CoA-dependent acyltransferases 60 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00054 Phac-Chr10 1241863 1244918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00054 60 457 Monolignol Biosynthesis Gene Families AT5G48930 26.905 9.12e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00054 - - var:108346317 850.506