Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00028 ATGGCCACCGCAACGGCAACAGCAGCGGCCACGTCCTCCTTCATGGGGACGCGCCTCCTGGAAGCGCATTCTGGGTCGGGCCGGGTCCAGGCCCGATTCGGGTTCGGGTCGAAGAAGAAGCCCGCGCCCAAGAAGGTATCAAAGGGCTCGGGCACTGAGAGGCCGTTGTGGTACCCCGGCGCGAAGTCACCGGAATGGCTTGACGGGAGCTTAGTCGGGGACTACGGGTTCGACCCGTTTGGGCTCGGGAAGCCTGCGGAGTATTTGCAGTTTGAGCTGGACTCGCTGGACCAGAACCTGGCGAAGAATGAGGCGGGGCTCATCATCGGCACCAGAACCGAGGTCGCAGACGTGAAGTCCACTCCCTTCCAGCCCTACAGCGAGGTCTTCGGCCTCCAGAGGTTCCGCGAGTGCGAGCTCATCCACGGACGCTGGGCCATGCTCGCCACCCTCGGAGCCCTCACCGTCGAGTGGCTCACCGGTGTCACATGGCAGGACGCCGGCAAGGTGGAGCTAGTAGAAGGATCATCATACCTTGGGCAACCACTTCCATTCTCAATCACCACATTGATCTGGATCGAGGTTCTGGTAATTGGGTACATTGAGTTCCAGAGGAACGCAGAGCTTGACCCAGAAAAGAGGTTGTACCCTGGTGGCAGCTACTTCGACCCTCTTGGTTTGGCCGCAGACCCAGAGAAGAGAGCCACTCTTCAGTTGGCAGAGATCAAGCACGCACGTCTTGCCATGGTGGGCTTCTTGGGCTTTGCAGTCCAAGCTGCTGCCACTGGCAAGGGCCCACTCAACAACTGGGCCACCCACTTGAGTGACCCACTCCACACAACCATCATTGACACCTTCTCATCCTCTTAA 870 0.5966 MATATATAAATSSFMGTRLLEAHSGSGRVQARFGFGSKKKPAPKKVSKGSGTERPLWYPGAKSPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNEAGLIIGTRTEVADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLAADPEKRATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00028 289 Gene3D Chlorophyll a/b binding protein domain 57 289 - -
Phac10g00028 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 285 IPR001344 GO:0009765|GO:0016020
Phac10g00028 289 MobiDBLite consensus disorder prediction 32 54 - -
Phac10g00028 289 FunFam Chlorophyll a-b binding protein, chloroplastic 109 288 - -
Phac10g00028 289 Pfam Chlorophyll A-B binding protein 64 259 IPR022796 -
Phac10g00028 289 SUPERFAMILY Chlorophyll a-b binding protein 52 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00028 Phac-Chr10 640051 642396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00028 14 289 Chloroplast and Mitochondria Gene Families AT3G08940 84.838 9.35e-173 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00028 K08915 - gmx:100785180 540.806