Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00015 ATGGAGGTGATGGAGAATGGTGTTGCAAACTTGAAGGGGTTGAGCAAGGAGATGAGACATGGAAGAACAGCACATAACATGTCATCTTCTTCCTTGCGCAAGAAATCTGACTTAACTCTTGTGTCTAAGGTTAGTTTTGGCCCTCTGAAAAATCTGCTGCTGAACATTCAAGAGGTTATTTTGGGAACCAAACTTTCCATTCTCTTCCCTGCTGTTCCCATTGCTATTGCTGCTCAATGCTATGGATTTGCAAAACCTTGGGTTTTTGCTTTGAGCTTACTGGGGCTTACCCCACTTGCTGAAAGACTCAGTTTTTTGACAGAACAGATTGCTTGTTACACTGGTCCCACAGTGGGAGGACTTATGAATGCAACATGTGGGAATGCTACAGAGCTCATTATAGCAATTTTTGCCCTTAGCCATAACAACATTGCTTTGGTCAAATATTCTCTTCTGGGTTCTATAATTTCTAACCTTCTTTTGGTTCTTGGAACCTCTCTAATCTGTGGAGGCCTTGTAAACCTTAGGCAGGAACAAAAATATGATAGAAGACAGGTAGATATGAACTTGCTTATGCTGTTTGTGGCATTGCATTGCCACTTGCTGCCAATGCTGTTCCATTATGCTGGTGCCTCAGAAGGTGTTGCTGCAGAATCCTCTCTGCAGTTGTCAAGAGCTGCTAGCGTTATCATGGTGATAGCATATTTTGCCTACCTTGTGTTCCAGCTGTGGACTCACAGACAACTCTTTGAAGACCCGGTTGAAAATGAAGAAGAGGGTGGCAATGATTCAGATGAAGCAGTGATAGGATTCTGGAGTGGGTGTGTTTGGCTGGTTGGGATGACTGTGATCATTGCAGTGCTGTCTGAATACGTGGTGCAAACAATTGAGGATGCATCTAATTCATGGGGTTTGTCTGTTAGCTTCCTCAGCATAATCTTGCTTCCAATAGTTGGAAATGCAACTGAACACGCTGGAGCAATCATATTTGCTTTCAAGAACAAACTGGACATCTCCTTGGGTGTTTGTTTGGGTTCTGCAACTCAAATTAGCATGTTTGTGGTTCCCCTTTGTGTGATTGTTGCTTGGATTCTGGGAATAGAAATGGACCTGAACTACAACCTCCTAGAATCAGGTTCTCTTACTTTGGCAATAATAACCACAGCCTTCACATTACAGGATGGAACTTCTCACTACATGAAAGGCCTTGTGCTCTTCCTGTGCTACATTGTTATTGGGGCATGCTTTTTCGTACAAAAAACACCCTCCAACAAAAACAATGCTTCTAACATAATTCTTAAATCAGCAAGGGGAGCAGTTTTTGGAACTTAA 1332 0.4257 MEVMENGVANLKGLSKEMRHGRTAHNMSSSSLRKKSDLTLVSKVSFGPLKNLLLNIQEVILGTKLSILFPAVPIAIAAQCYGFAKPWVFALSLLGLTPLAERLSFLTEQIACYTGPTVGGLMNATCGNATELIIAIFALSHNNIALVKYSLLGSIISNLLLVLGTSLICGGLVNLRQEQKYDRRQVDMNLLMLFVALHCHLLPMLFHYAGASEGVAAESSLQLSRAASVIMVIAYFAYLVFQLWTHRQLFEDPVENEEEGGNDSDEAVIGFWSGCVWLVGMTVIIAVLSEYVVQTIEDASNSWGLSVSFLSIILLPIVGNATEHAGAIIFAFKNKLDISLGVCLGSATQISMFVVPLCVIVAWILGIEMDLNYNLLESGSLTLAIITTAFTLQDGTSHYMKGLVLFLCYIVIGACFFVQKTPSNKNNASNIILKSARGAVFGT* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00015 443 Gene3D - 260 418 IPR044880 -
Phac10g00015 443 Gene3D - 116 259 IPR044880 -
Phac10g00015 443 Pfam Sodium/calcium exchanger protein 86 244 IPR004837 GO:0016020|GO:0055085
Phac10g00015 443 Pfam Sodium/calcium exchanger protein 276 412 IPR004837 GO:0016020|GO:0055085
Phac10g00015 443 NCBIfam calcium/proton exchanger 70 417 IPR004798 GO:0006816|GO:0015369
Phac10g00015 443 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 18 421 IPR004713 GO:0006812|GO:0008324|GO:0016020
Phac10g00015 443 FunFam Vacuolar cation/proton exchanger 262 418 - -
Phac10g00015 443 NCBIfam calcium/proton exchanger 50 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00015 Phac-Chr10 595666 600227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00015 3 425 Antiporters AT2G38170 66.744 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00015 K07300 - gmx:100782052 689.878