Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9g00009 ATGGGAAAAGGAAGAGCACCATGCTGTGATAAGACTCAAGTGAAGAGAGGTCCTTGGAGCCCTGCAGAAGACCTTAAGCTCATAGCTTTCATCCAGAAATATGGCCATGAAAACTGGCGCGCTCTCCCAAAACAAGCAGGGCTTATGCGATGTGGGAAAAGTTGTCGTTTGAGATGGATCAATTATCTCAGGCCTGATGTGAAGAGAGGCAATTTTACACCAGAGGAAGAGGAAACCATAATAAGGCTACATAAGGCCTTGGGAAACAAGTGGTCAAAGATTGCATCACGTTTGCCTGGTAGGACTGACAATGAGATCAAGAATGTGTGGAACACCCACTTGAAGAAAAGATTGGCTACCAAGAAAAGTTCACAATCAAGTGCAGATGAATCCAAGCCAGAATCATCAATAACTTCCTCCTCTTCATGTTCATCTGAATCATTTTTCTCAAATAAGAGACCAAATTCACCAAAGACCACAACACCTGGCAATGAATTTAGTGACCAGGCAGAGAAATCATCAATGACAGATAAAATTGAGCAGGATTCAGAAAAACAAGTGTGCAATGAACTTATTGGCATCGCTGAGGATCCAAAAGAGTCATCAGTTTCATTATCTTCTGTTGAGTCAAATATTGTGAACACAAGCCAGATTGTTGCTTACAAACCAGAGCAACAATTGGCTTCCCCATTATCCTATCTAGGACCCTATGATGTTGACAGTATATTAGAAGAGGTGGATAAACCAAACCACCTGATTGAAATACCATGGGAATCAGATTATGATTTTTGGAAGTTGTTAGATGATGATAGCCTTGGATCTTTTCAATCAAATGAAGTCCAATTAGGTGAGTTCCCAGCCAGCCAAAACATTATTCTTGGAGAAGAGAGTGTTCAAGATGATGAAGCCAGGAAGTGGTCCCATGATATTGAGAATGAGTTTGGAGTAGTAGGTGAGATAAAGGAGTCAAACAAGGATCATTTCTTACCAAAGAATTATGCAGTTGAGCCACAAATGGACCACACTCAGACATTTGATTTTGATGATATGACAAGACCAGAATCTGAGTTAGACTTTGGTTATATCCAATTGTGGCCCTCTTGGCCTCAAAATACTAGTTATATTTCTAATCAACGTGAAACTTAA 1146 0.4023 MGKGRAPCCDKTQVKRGPWSPAEDLKLIAFIQKYGHENWRALPKQAGLMRCGKSCRLRWINYLRPDVKRGNFTPEEEETIIRLHKALGNKWSKIASRLPGRTDNEIKNVWNTHLKKRLATKKSSQSSADESKPESSITSSSSCSSESFFSNKRPNSPKTTTPGNEFSDQAEKSSMTDKIEQDSEKQVCNELIGIAEDPKESSVSLSSVESNIVNTSQIVAYKPEQQLASPLSYLGPYDVDSILEEVDKPNHLIEIPWESDYDFWKLLDDDSLGSFQSNEVQLGEFPASQNIILGEESVQDDEARKWSHDIENEFGVVGEIKESNKDHFLPKNYAVEPQMDHTQTFDFDDMTRPESELDFGYIQLWPSWPQNTSYISNQRET 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9g00009 381 MobiDBLite consensus disorder prediction 117 182 - -
Mupr9g00009 381 Gene3D - 70 141 - -
Mupr9g00009 381 FunFam MYB transcription factor 70 144 - -
Mupr9g00009 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Mupr9g00009 381 FunFam Transcription factor RAX3 9 69 - -
Mupr9g00009 381 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Mupr9g00009 381 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Mupr9g00009 381 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Mupr9g00009 381 MobiDBLite consensus disorder prediction 124 170 - -
Mupr9g00009 381 CDD SANT 71 114 IPR001005 -
Mupr9g00009 381 Gene3D - 16 68 - -
Mupr9g00009 381 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Mupr9g00009 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Mupr9g00009 381 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 206 - -
Mupr9g00009 381 CDD SANT 18 63 IPR001005 -
Mupr9g00009 381 SMART sant 15 65 IPR001005 -
Mupr9g00009 381 SMART sant 68 116 IPR001005 -
Mupr9g00009 381 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9g00009 Mupr-Chr9 18455 21414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9g00009 1 316 MYB Transcription Factor Family AT1G79180 45.272 1.10e-76 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr9g00009 Myb_DNA-binding 1.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9g00009 K09422 - gmx:100101836 642.884