Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr99g00004 ATGTCAACCTCTGGAACCTCAGAAACTTCCCTCAAAAACCAAACCCAAATGAATTCATCTCCTCGTCAACTTAACACATCTCCTTCTGGTGAGAGAAGAGGGCGAGGAAAGCAAGCAGAACCAGGAAGGTTTCTTGGTGTAAGGAGGCGTCCATGGGGTAGATATGCTGCTGAAATCAGAAACCCTTTAACCAAAGAAAGACATTGGCTTGGAACATTTGACACTGCTCAAGAAGCAGCTCTTGCTTATGACAGAGCTGCTCTGTCCATGAAAGGATGCCAAGCAAGAACCAACTTCATATACTCTAAAAAAGATTCCAACAACACTTTCCACAATGTTCTCACTCCTTTGGATGCTCAACCTCTCTTGCCACCTTCACACTTCCTCACTAACACTCAACACAACATACAACAACCAACCATTCAAAGTGGCCTATCTCATCTTGGTACTATCACCTCCCACATTGAAAACCCTTCTCAGGATGACAATTTCTTCTTCTCCAGTGATTCTAACTCGGGCTATCTTGAATGCATAGTTCCTGATAATTGTTTCAGGAAGAGCAATGCTTCAAGCCACGTTAACTCAAACTCCATGCAGGGTCAGTCACACTTTGACACCACAAAAGAAGCCTTGAACATGCAAACAACAAACTTTGCAGATTTTTCTTACCCAAGTGAAGTTGGTCAAGGATTATGGGACAATCAGCAATCATGGGGTTGCAGTTCCAATGAACTAGCAGCTATGTTTAACAATCCATCAAGGGTTGAGGAAGGGTTCACTCATGGTCCAAACTATGGGTTAATGACTCAGGCTGAGGCTGTTTCTTCATCTACCTATTCTCCATCACTCCCTCCCTTTGGGGATGGGTGCCTTTCACTTAGCCCTTCTGTCCTTGCACTGCATGCACTTCCTACGTCTATAAGTTTTTTTGACATGGAATCTTACTCAGCTAAGAAAAACTTGGAAAATGCAATAGGATAA 981 0.4322 MSTSGTSETSLKNQTQMNSSPRQLNTSPSGERRGRGKQAEPGRFLGVRRRPWGRYAAEIRNPLTKERHWLGTFDTAQEAALAYDRAALSMKGCQARTNFIYSKKDSNNTFHNVLTPLDAQPLLPPSHFLTNTQHNIQQPTIQSGLSHLGTITSHIENPSQDDNFFFSSDSNSGYLECIVPDNCFRKSNASSHVNSNSMQGQSHFDTTKEALNMQTTNFADFSYPSEVGQGLWDNQQSWGCSSNELAAMFNNPSRVEEGFTHGPNYGLMTQAEAVSSSTYSPSLPPFGDGCLSLSPSVLALHALPTSISFFDMESYSAKKNLENAIG 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr99g00004 326 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 18 214 - -
Mupr99g00004 326 SUPERFAMILY DNA-binding domain 44 101 IPR016177 GO:0003677
Mupr99g00004 326 Gene3D AP2/ERF domain 43 101 IPR036955 GO:0003700|GO:0006355
Mupr99g00004 326 FunFam Ethylene-responsive transcription factor 2 43 101 - -
Mupr99g00004 326 CDD AP2 43 99 IPR001471 GO:0003700|GO:0006355
Mupr99g00004 326 PRINTS Ethylene responsive element binding protein signature 66 82 IPR001471 GO:0003700|GO:0006355
Mupr99g00004 326 PRINTS Ethylene responsive element binding protein signature 44 55 IPR001471 GO:0003700|GO:0006355
Mupr99g00004 326 SMART rav1_2 43 106 IPR001471 GO:0003700|GO:0006355
Mupr99g00004 326 MobiDBLite consensus disorder prediction 1 32 - -
Mupr99g00004 326 Pfam AP2 domain 46 92 IPR001471 GO:0003700|GO:0006355
Mupr99g00004 326 ProSiteProfiles AP2/ERF domain profile. 43 100 IPR001471 GO:0003700|GO:0006355
Mupr99g00004 326 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr99g00004 Mupr-Chr99 23896 25705 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr99g00004 14 288 AP2-EREBP Transcription Factor Family AT5G18560 38.138 2.32e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr99g00004 AP2 5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr99g00004 - - gmx:102664746 437.958