Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr99g00002 ATGGAGCAGTACGGCCCGTCCAGTGAAGGTTCTCGGTCTGATCCGTCGCCGGAATGGGCCGGGCCCGGAGGTGAAACTGGGCTTGAAGAGCCTATGTGGCAATTGGGATTGGGTGCGGCGGAGGAAACGTATCCGCAACGGCCCGATGAGGCTGATTGCACCTACTATTTGAGGACCGGCTTCTGTGGCTTCGGTTCGCGGTGTCGGTTCAACCATCCTCGTGACCGTGGCGCGGTTGTTGGAGTTGAGAGGATTGCAGGGGACTATCCAGAACGAGTAGGCCAGCCTGTGTGCCAGTTAAAACTTCAAATGCAGTATTATATGAGGACGAGAACGTGCAAGTTTGGTTTGTCTTGCAAGTACCACCACCCTAGGCAGGCAGGAGGCACTGCTACTCCCGTGGCACTAAATTATTATGGATATCCGTTGCGACCGGGTGAGAAGGAGTGTTCCTATTATGTGAAAACGGGACAATGCAAGTTTGGTTCAACTTGTAAATTCCATCATCCAGTTCCTGCTGGCATCCAAATTCCAGCAGCACCATCGCCAGTTGCCCCAGTTTCGCCTTTATCTGTACCGGTACCTTCACCGTTATATTCAACCATGCAGCCCCCACCTGGTCCTTCATCCCAGCAAATTGGTGTGCTGGTTGCAAGGCCTCCTCTGCTGCATGGCTCATTAGTTCAGAGCCCCTATGGACCTGTGGTAGTGTCCCCTGCCATGGTACCTTTTTCTGGCTGGGGTCCTTATCAAGCTTCTGCAACAGGCCCTGTACTTCATTCTGGTACTCCATCTAATGTTGGTTCAGCACAGCTTTATGGGATAACCCAGCTATCTTCGTCAGCAGCTGCCTATCCTGGACCTTATCAACCTTCTGGTTCCTCAGTTGGTCCTTCAAGCAGTAGTCAGAAGGAGCAGGCATTTCCAGAAAGGTCTAGTCAACCAGAATATCAGTATTACCCGAAAACAGGGGAGGTTAAATTTGGTCCATCATATAGGTATCACCCTCCGCCAGACATGAGTGCACCAAAAGCAAATGTGATTCTTAGTCCTGCAGGTCTTCCTTTGCGCCAGGGGGCACCAGCTTGCACTCATTATGCACAACATGGAGTGTGTAAGTTTGGTTCTGCATGCAAATTTGATCATCCTATGGGATCACTGGACATGCCAGTTGCACCCTATCACGTGGGTTCAACAATTGGTACTCTTGCTCCATCATCTTCATCATCAGGGTCAATTGGTTTGACTTTGTTGACTGGTGGACCTGTTTCTCAGTCAAACACTCAACCATCTGCTCAGAGTTCGGATCCTTTAGCAACTGCCGCTACAACCACAAGTAGCAAT 1344 0.506 MEQYGPSSEGSRSDPSPEWAGPGGETGLEEPMWQLGLGAAEETYPQRPDEADCTYYLRTGFCGFGSRCRFNHPRDRGAVVGVERIAGDYPERVGQPVCQLKLQMQYYMRTRTCKFGLSCKYHHPRQAGGTATPVALNYYGYPLRPGEKECSYYVKTGQCKFGSTCKFHHPVPAGIQIPAAPSPVAPVSPLSVPVPSPLYSTMQPPPGPSSQQIGVLVARPPLLHGSLVQSPYGPVVVSPAMVPFSGWGPYQASATGPVLHSGTPSNVGSAQLYGITQLSSSAAAYPGPYQPSGSSVGPSSSSQKEQAFPERSSQPEYQYYPKTGEVKFGPSYRYHPPPDMSAPKANVILSPAGLPLRQGAPACTHYAQHGVCKFGSACKFDHPMGSLDMPVAPYHVGSTIGTLAPSSSSSGSIGLTLLTGGPVSQSNTQPSAQSSDPLATAATTTSSN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr99g00002 448 SMART c3hfinal6 92 125 IPR000571 GO:0046872
Mupr99g00002 448 SMART c3hfinal6 357 384 IPR000571 GO:0046872
Mupr99g00002 448 SMART c3hfinal6 47 74 IPR000571 GO:0046872
Mupr99g00002 448 SMART c3hfinal6 144 171 IPR000571 GO:0046872
Mupr99g00002 448 SUPERFAMILY CCCH zinc finger 361 388 IPR036855 GO:0046872
Mupr99g00002 448 ProSiteProfiles Zinc finger C3H1-type profile. 92 126 IPR000571 GO:0046872
Mupr99g00002 448 ProSiteProfiles Zinc finger C3H1-type profile. 357 385 IPR000571 GO:0046872
Mupr99g00002 448 MobiDBLite consensus disorder prediction 410 448 - -
Mupr99g00002 448 MobiDBLite consensus disorder prediction 284 319 - -
Mupr99g00002 448 SUPERFAMILY CCCH zinc finger 146 171 IPR036855 GO:0046872
Mupr99g00002 448 Gene3D - 356 400 - -
Mupr99g00002 448 ProSiteProfiles Zinc finger C3H1-type profile. 47 75 IPR000571 GO:0046872
Mupr99g00002 448 Gene3D - 45 130 - -
Mupr99g00002 448 MobiDBLite consensus disorder prediction 284 320 - -
Mupr99g00002 448 Gene3D - 131 176 - -
Mupr99g00002 448 SUPERFAMILY CCCH zinc finger 49 75 IPR036855 GO:0046872
Mupr99g00002 448 ProSiteProfiles Zinc finger C3H1-type profile. 144 172 IPR000571 GO:0046872
Mupr99g00002 448 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 49 74 IPR000571 GO:0046872
Mupr99g00002 448 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 146 170 IPR000571 GO:0046872
Mupr99g00002 448 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 105 125 IPR000571 GO:0046872
Mupr99g00002 448 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 360 384 IPR000571 GO:0046872
Mupr99g00002 448 PANTHER PROTEIN PHOSPHATASE RELATED 38 412 - -
Mupr99g00002 448 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr99g00002 Mupr-Chr99 14561 21196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr99g00002 1 447 C2H2 Transcription Factor Family AT5G18550 53.191 1.23e-142 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr99g00002 zf-CCCH 9.5e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr99g00002 - - gmx:100812433 712.22