Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9994g00001 ATGGCTAACACAGACGGTAATGTTTGTACCCATTTAACATTGGGTATGTGTCCTTGTACCCCAACCAAGACAGATGATTTCGGTTCTTCCCCTTCTTCTTTCGCCACAAAGAAGAGGAAACTTCGCATCAAAGTCCGCTTTGCTGCAAGAAAGAAGAGTCGGAATGTTGATGACCTTTGGAAATTCAAGAAAGTGTTGAAAGAGAGTGATGTTGGGAACATGACCAGACTCATGATCGGGAGAGATATGGCAGAGGACTTTGTACTGCCTATGTTAAATGCTGATGCTGATGAGATTGACAGAGGAGTTGATGTCAAGATTTTTGATGTGGACACTGACTCCACGCACTCTCTTGTTTTCAAGAAATGGGTTTCTTCAAGAAGCTATGTTTTCATTGGCAACTGGGGAAAAGATTTTGTTGCAAGAAGGGGCCTAAAGAAAGGAGATGAGATTGGCTTTCAATGGAATCCACTCAACAATGGGTTTGACTTCTCTGTTCTTCAAAACCACACCACGACCTAA 522 0.4253 MANTDGNVCTHLTLGMCPCTPTKTDDFGSSPSSFATKKRKLRIKVRFAARKKSRNVDDLWKFKKVLKESDVGNMTRLMIGRDMAEDFVLPMLNADADEIDRGVDVKIFDVDTDSTHSLVFKKWVSSRSYVFIGNWGKDFVARRGLKKGDEIGFQWNPLNNGFDFSVLQNHTTT 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9994g00001 173 CDD B3_DNA 60 167 IPR003340 GO:0003677
Mupr9994g00001 173 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 19 169 - -
Mupr9994g00001 173 SUPERFAMILY DNA-binding pseudobarrel domain 58 158 IPR015300 -
Mupr9994g00001 173 Gene3D - 57 171 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9994g00001 Mupr-Chr9994 1852 2876 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9994g00001 62 159 RAV Transcription Factor Family AT3G61970 31.633 8.74e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9994g00001 - - gmx:102663812 218.779