LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr9992g00002	ATGATGCAGCGACCATGTTCCTCTTCTTCCACCTATGAATGGAAATATGATGTGTTCCTCAGTTTCAGAGGCGATGATACTCGAAGTGGCTTTACTGGCAACCTTTATAGAGATCTTTGTGAGAGAGGAATCCACACCTTCATAGATGATGAAGAGCTTAGAAGAGGGGAGGAGATTAGACCAGCTCTTTTCAAGGCAATTGAGCAGTCTAGAATTGCCATTGTTGTTTTCTCTAAAAACTATGCTTCCTCGGTTTATTGTCTTGAAGAACTTGTCGTAATCCTTGAGTGCATAATGAGAAAGGGTCGACTGGTTTGGCCAATTTTTTATGGGGTGAGTCCATATTACGTGCGGTTTCAGAAAGGTTCTTATGGGAAAGCATTGGCTAAGCATGAAGAAAGATTCACGAATGACAGGGATAAGTTGCAAAAATGGAAGGTAGCTCTACAAGAAGCAGCTAATTTGTCTGGTTCACATTTCAAATTCAAACAAGGGTACGAATATAGATTTATTCAGAAAATTGTTGAAGAGGTGTCCAAAAAGATAAATCGTAGCCCTTTACATGTGGCTAATTATCCAATTGGATTGGACTCTAGAGTGCAAGAGGTGAACTCACTTTTGGATGTTGGATCCAATCAAGGAGTAAGCATGGTTGGGATTTATGGAATTGGGGGAATAGGTAAAACCACAATTGCTTGTGCAGCGTATAATGTCATTGCTGATCAATTTGAAGGTCAATGTTTTCTTGCTGATATTAGAGAAAATTCAACGAAGTATGGCTTAGTACAACTTCAGGAGACAATACTTTCTGAAATGGTTGGGGAGAAGAGTATCAAGTTGGGGAGCATTAACCGGGGAAAGACAATATTGAAAAGCAAGCTTCAGCGAAAGAAAGTTCTTTTGATTCTTGATGACGTTGATAAATTGGAGCAATTAAACACACTTGCTGGTGATCCTTCTTGGTTTGGTTGTGGCAGCAAAATCATTGTCACAACAACGAATAAGCATTTGCTACATGTACATGGTGTTGAAAAAACATATGAGGCAAAAGGATTAAATCATAAAGAAGCTCTTGAGTTGTTTAGTTGGCATGCTTTTAAAAGCAATGAGGTTGGTTCAAGTTACATGGATATCTCTAATCGTGCGATACTTTATTCCAATGGCCTTCCATTGGCTTTGGAAATAATAGGTTCTAACTTAAATGGTAAAACAATGTCTGAATGGAAAGCAGCATTAGATACCTATGAAAGAATCCCAGATGAAGATATTCAGGAAAAACTGAAAGTAAGCTATGATGGTTTGAAAGGAAATGAGAAGGAACTTTTCCTTGACATGGCTTGTTTCTTTAGAGGTTACAATTTGAAAGATGTCATAAGTTTATTTCTCCAAGGTCGTGGTTTCTCACCAGAGTATGCTATTCGAGTGTTGATTGATAAATCTCTCATAGAGATCGATCAATATGATTTTGTTAGAATGCATAACTTGGTAGAGGACATGGGCAGAGAAATTGTTAGGAGGGAATCTCCATCAGAACCTGGAAAACGCAGTAGATTATGGCTTTATGAGGATATTGTTGATGTTTTAGAAAATGACAAGGGAACTGATACAATTGAAGTAATCATGCTACACTTGGCAAAGAATAAGGAAGTTCAATGGAATGGAAGTGAGCTCAAGAAGATGACAAACCTAAAGATACTAACTATTGAAAATGCTAACTTTTCTAGAGGCCCTGAACATCTCCCAAATAGTTTGAGAGTACTAAAATGGTGGGGATATCCTTCACCATCTCTGCCACCTGAATTTGATCCGAGGAAACTTGTTATGTTAGACTTGTCTATGAGTTGCAATATACTGGGCAAACAACTCAAACTCATGAATTTCGAGTCTTTGAGTGAAATGGTTTTAAGAGGTTGCAGATTCATAAAAAAGGTACCTGACATGTCTGGAGCCCAAAATTTAATGAAGCTGTATCTTGATGAGTGCAAGAGTTTAGTAGAAGTTCATGATTCCATCGGGCTTCTTGACAAACTTACATGGTTCTCTGCTATTGGATGCACCAATCTAAGGATTCTTCCCCACAGCTTCAAGTTAACATCACTTGAATACCTGTCTCTCAGGAAATGCTCAAGTCTCCACTGTTTGCCAAATATATTAGAAGAAATGAAACTTATAAAAAATCTTGATCTGTGTGGAACTGCTATTGAAGAATTGCCATTTTCGTTTAGCAAACTCACTGGGCTTAAATATTTAGTGCTGGACAAGTGCAAGATGCTTAATCAGATCCCACTAAGTATTTTGATGTTACCAAAACTTGAGAGATTGACAGCTGTAAAATGTGGACAATATGTAAATTTGGTCCTTGGTAAAAGTGAAGGACAAGTGGGTTCATCCGAGTCTCAGAGAGATGTTAGATTAAACTACAATGATTTGACACCTGCCAGCTTCTCTAATGTAGAATTCTTAGTCCTAACTGGTTGTGCTTTCAAAGTCCTTCCTGAATACATCAGCCAATGTCGCTTTCTAAAGAATCTAGTTTTGGACAACTGCAAGGAGCTTCAAGAAATCAGAGGGGTTCCTCCAAAGATAAAATATCTCTCGGCAATAAACTGCACATCATTGACTCGTAAGTCTCAAAGCATGTTATTGAATCAGAGATTACATGAGGGTGGAGGCACAGATTTTTCCCTTCCAGGAACAAGGATACCAGAATGGTTCGACCATTGTACTACAGGACCATCCCTGTCTTTCTGGTTTCGTAACAAATTTCCAAGGATGGCTCTATCTGTTGTTGGGATTTTGGACAAGCAGGGCTGTTTTCCCATGTCAAGATTCGACTTGCTCATCAATGGCACTCAAAAGCTGCATTGCCATTTCACTGTGCAATCAAAACTAAACACATATCATATATTCTTGTCTGATTTACAGCTCAAATCCTACAATGGTAAATTGGAAAATGTGCATGGGGAAGATGGGTGGAATCATGTTGAGGTTTCATATGTGGGACCAAGGGCCTTTCCACATTCATGCAGAGCCAAGAAAGGAACCATTAAATGGATGGGGGTTCATGTTTACAAGCAAAAAACATGCATGCAGGATGTCCGGTTCACAAATTATAGGTCTCCAAAGAGAGCATATAGCGAAGTTTCCAAGCACGATTTGAACGGAAGTTTTCAATCATTGCTCAAAAGAAGCCGTGGATCACATGAAATGGAAATTTGTGAGCCACCACATATGAAGCAGCATGAAGTTAATGGTGGTTGTCATGGTGTGTCACAGAGACTATGGTTGGCAATTTGCAGCATTGTAGCTCCTCGTGATGTTAAAGTCCTAATGTGGAATAGTTGCCAAGATGCTTTGCCAACTTATGAATATCTTTTCAGGAGGAAGCTTGTAAATAGCCCACTCTGCCCCATTTGTGGAACTGAACCTGAAACCGTTGAACATGTGTTCCTGGTTTGCCCATGGACTCGACCCTTTTGGTTTGGAAGTGATTTCCAGTGGTGCAATGATGTCAGTCCAGTTCAAAGCTTTCAACTTTGGCTTTACCAGAAACTCGTGGAGATTCAAAGGATATATCCAGAAAATGCCAACCATGTATCTGCTCTGGTGGGAAGTATTTGTTGGGCTATTTGGAAAGGTAGGAATGAATTTGTTTTTGAAGGCAAACCTGTTAATCCGTTGATTTTAATGAATTCTATAGCT	3702	0.3917	MMQRPCSSSSTYEWKYDVFLSFRGDDTRSGFTGNLYRDLCERGIHTFIDDEELRRGEEIRPALFKAIEQSRIAIVVFSKNYASSVYCLEELVVILECIMRKGRLVWPIFYGVSPYYVRFQKGSYGKALAKHEERFTNDRDKLQKWKVALQEAANLSGSHFKFKQGYEYRFIQKIVEEVSKKINRSPLHVANYPIGLDSRVQEVNSLLDVGSNQGVSMVGIYGIGGIGKTTIACAAYNVIADQFEGQCFLADIRENSTKYGLVQLQETILSEMVGEKSIKLGSINRGKTILKSKLQRKKVLLILDDVDKLEQLNTLAGDPSWFGCGSKIIVTTTNKHLLHVHGVEKTYEAKGLNHKEALELFSWHAFKSNEVGSSYMDISNRAILYSNGLPLALEIIGSNLNGKTMSEWKAALDTYERIPDEDIQEKLKVSYDGLKGNEKELFLDMACFFRGYNLKDVISLFLQGRGFSPEYAIRVLIDKSLIEIDQYDFVRMHNLVEDMGREIVRRESPSEPGKRSRLWLYEDIVDVLENDKGTDTIEVIMLHLAKNKEVQWNGSELKKMTNLKILTIENANFSRGPEHLPNSLRVLKWWGYPSPSLPPEFDPRKLVMLDLSMSCNILGKQLKLMNFESLSEMVLRGCRFIKKVPDMSGAQNLMKLYLDECKSLVEVHDSIGLLDKLTWFSAIGCTNLRILPHSFKLTSLEYLSLRKCSSLHCLPNILEEMKLIKNLDLCGTAIEELPFSFSKLTGLKYLVLDKCKMLNQIPLSILMLPKLERLTAVKCGQYVNLVLGKSEGQVGSSESQRDVRLNYNDLTPASFSNVEFLVLTGCAFKVLPEYISQCRFLKNLVLDNCKELQEIRGVPPKIKYLSAINCTSLTRKSQSMLLNQRLHEGGGTDFSLPGTRIPEWFDHCTTGPSLSFWFRNKFPRMALSVVGILDKQGCFPMSRFDLLINGTQKLHCHFTVQSKLNTYHIFLSDLQLKSYNGKLENVHGEDGWNHVEVSYVGPRAFPHSCRAKKGTIKWMGVHVYKQKTCMQDVRFTNYRSPKRAYSEVSKHDLNGSFQSLLKRSRGSHEMEICEPPHMKQHEVNGGCHGVSQRLWLAICSIVAPRDVKVLMWNSCQDALPTYEYLFRRKLVNSPLCPICGTEPETVEHVFLVCPWTRPFWFGSDFQWCNDVSPVQSFQLWLYQKLVEIQRIYPENANHVSALVGSICWAIWKGRNEFVFEGKPVNPLILMNSIA	1234

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr9992g00002	1234	Pfam	zinc-binding in reverse transcriptase	1101	1160	IPR026960	-
	Mupr9992g00002	1234	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	16	764	IPR044974	GO:0006952
	Mupr9992g00002	1234	SUPERFAMILY	L domain-like	538	881	-	-
	Mupr9992g00002	1234	PRINTS	Disease resistance protein signature	695	711	-	-
	Mupr9992g00002	1234	PRINTS	Disease resistance protein signature	293	307	-	-
	Mupr9992g00002	1234	PRINTS	Disease resistance protein signature	386	400	-	-
	Mupr9992g00002	1234	PRINTS	Disease resistance protein signature	217	232	-	-
	Mupr9992g00002	1234	Gene3D	-	12	178	IPR035897	-
	Mupr9992g00002	1234	Gene3D	Ribonuclease Inhibitor	521	892	IPR032675	-
	Mupr9992g00002	1234	SUPERFAMILY	"Winged helix" DNA-binding domain	422	529	IPR036390	-
	Mupr9992g00002	1234	Pfam	NB-ARC domain	199	423	IPR002182	GO:0043531
	Mupr9992g00002	1234	ProSiteProfiles	TIR domain profile.	14	182	IPR000157	GO:0007165
	Mupr9992g00002	1234	SMART	till_3	15	155	IPR000157	GO:0007165
	Mupr9992g00002	1234	Gene3D	-	351	435	IPR042197	-
	Mupr9992g00002	1234	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	182	444	IPR027417	-
	Mupr9992g00002	1234	FunFam	Disease resistance protein (TIR-NBS-LRR class)	12	184	-	-
	Mupr9992g00002	1234	Pfam	TIR domain	15	185	IPR000157	GO:0007165
	Mupr9992g00002	1234	SUPERFAMILY	Toll/Interleukin receptor TIR domain	6	157	IPR035897	-
	Mupr9992g00002	1234	Gene3D	-	179	345	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr9992g00002	Mupr-Chr9992	12883	17518	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr9992g00002	16	779	WRKY Transcription Factor Family	AT4G12020	33.376	4.45e-95	334

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr9992g00002	-		-	gmx:100810811	2093.93