LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr997g00002	ATGAGTTGCTTTTCATGTTTTTCGTCGAACGAAAAGAAACAAGCAAAGAAGTCTAACAAAGGAAAGAGGATACAACAGTCTGCTACTCAATCTCCCAAGGCATCAGCCCAACAAGCTCAGATACGGCCAGAGCATCATAATCACAAGGCAAAGGAAACCCCACGTACAGAACCTAAAATAAACAAGGAGGCCAACAAAGATAATGGGAACAACAACATTGCTGCCCAAACGTTCACGTTCAGGGAATTGGCTACTATCACAAAGAACTTCAGGAAGGAATGCCTAATAGGTGAAGGTGGTTTTGGGAGGGTTTATAAAGGAAAACTTGAAAAAACCAACCAGGAAGTAGCTGTGAAGCAACTTGACAGGAATGGGTTACAAGGGAACAGAGAGTTTCTTGTTGAAGTTTTAATGTTGAGCCTCTTGCACCATCAAAATCTAGTGAATCTAATTGGATATTGTGCTGATGGAGATCAGAGATTATTGGTGTATGAGTACATGCCATTGGGATCACTTGAGGACCATCTGCTTGATCTTCCTCCACAACAAAAGCCTCTAGAATGGTTCACCAGAATGAAAGTAGCTTTGGAAGCTGCAAAAGGTCTAGAATATTTGCATGACAAGGCCAATCCTCCAGTCATCTACCGCGACTTAAAATCCTCTAACATCTTGCTGGACAGAGATTTCAATGCAAAACTCTCTGATTTTGGACTAGCAAAGTTAGGACCCACAGGGGACAAGTCTCATGTCTCTTCAAGAGTAATGGGTACTTATGGATATTGTGCTCCTGAGTATCAAAGAACTGGTCAGCTAACTGTAAAATCAGATGTATACAGCTTTGGAGTTGTTTTGCTTGAATTGATCACTGGAAAAAGAGCCATTGATAACACAAGAACGACACGGGAGCATAATCTAGTTTCTTGGGCATATCCAATATTCAAGGACCCTCACAGATACAAAGAATTAGAAGACCCCCTTCTGAAAGGAAATTTTCCAGTAAGATCGTTGCATCAAGCAGTGGCAGTAGCAGCTATGTGCCTCAACGAGGAACCATCAGTGAGGCCCTTGATCAGTGATGTTGTGACTGCTCTTAGTTTCCTTGGGACATGTCCAGGGAGTCAAGACGTTGCAAGAATTACACCCGTTGACATGCCCTCCCCACCACCAGAGCAAGAAGCTAAGAGTTCTTCTCCTTTGAGTATTTTTGATAGTGATCAAAGTGCCTTGGAACGCCAAAGGGCAGTTGCTGAAGCCATTGAGTGGGGTACAAATACTAGGAACAGAACACCACCGCGTGGAAGTCCTTCCTCATCCTAA	1317	0.4313	MSCFSCFSSNEKKQAKKSNKGKRIQQSATQSPKASAQQAQIRPEHHNHKAKETPRTEPKINKEANKDNGNNNIAAQTFTFRELATITKNFRKECLIGEGGFGRVYKGKLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLPPQQKPLEWFTRMKVALEAAKGLEYLHDKANPPVIYRDLKSSNILLDRDFNAKLSDFGLAKLGPTGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGKRAIDNTRTTREHNLVSWAYPIFKDPHRYKELEDPLLKGNFPVRSLHQAVAVAAMCLNEEPSVRPLISDVVTALSFLGTCPGSQDVARITPVDMPSPPPEQEAKSSSPLSIFDSDQSALERQRAVAEAIEWGTNTRNRTPPRGSPSSS	438

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr997g00002	438	MobiDBLite	consensus disorder prediction	42	64	-	-
	Mupr997g00002	438	SMART	serkin_6	90	367	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr997g00002	438	ProSiteProfiles	Protein kinase domain profile.	90	367	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr997g00002	438	Pfam	Protein kinase domain	92	361	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr997g00002	438	FunFam	Serine/threonine-protein kinase PBS1	62	166	-	-
	Mupr997g00002	438	PANTHER	OS07G0668900 PROTEIN	3	370	-	-
	Mupr997g00002	438	FunFam	Serine/threonine-protein kinase PBS1	167	380	-	-
	Mupr997g00002	438	Gene3D	Phosphorylase Kinase; domain 1	60	166	-	-
	Mupr997g00002	438	Gene3D	Transferase(Phosphotransferase) domain 1	167	371	-	-
	Mupr997g00002	438	MobiDBLite	consensus disorder prediction	422	438	-	-
	Mupr997g00002	438	MobiDBLite	consensus disorder prediction	393	407	-	-
	Mupr997g00002	438	MobiDBLite	consensus disorder prediction	21	41	-	-
	Mupr997g00002	438	MobiDBLite	consensus disorder prediction	1	72	-	-
	Mupr997g00002	438	CDD	STKc_IRAK	96	364	-	-
	Mupr997g00002	438	ProSitePatterns	Protein kinases ATP-binding region signature.	96	119	IPR017441	GO:0005524
	Mupr997g00002	438	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	213	225	IPR008271	GO:0004672\|GO:0006468
	Mupr997g00002	438	MobiDBLite	consensus disorder prediction	382	438	-	-
	Mupr997g00002	438	SUPERFAMILY	Protein kinase-like (PK-like)	76	390	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr997g00002	Mupr-Chr997	12104	15643	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr997g00002	1	426	Glycoside Hydrolase	AT3G07070	65.888	0.0	554

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-1	Mupr997g00002		Pkinase	4.7e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr997g00002	-		-	gmx:100786405	726.087