Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9978g00002 ATGGAAGGCTGTGAGAAGTATATAGCACAGAGGGATAAGGGAAAAAATGGAGCGATAGTGCCGTCGTGTGCTTGTTCGCGCGAGGAATTTCGCGCACGTGGTGGTGCTGCTGCTGCTGCAAGAAACGGTTCTTCAACTTCAAATTACGATATGGCTGTGACGAGGAATGTTAAGAAAAAGCAAAAGCGTAAAGGTCTTCAAGAGCTCTTTACAACCGATTACATTGTGAACAACGTGTTACGGGAGGGTGGTCCTCCTCTTGGTCAGGATTTTGATTTTCTTCCTTCTGGACCCAAATATTTCACTTCTGCTTGTCAAGAGGACCAAGGATCCTCCAAAAGGAGGAAGGTGACTTTTACTATCCGAAGAAAGTTTTTTGATGTTTCCAAGAGTGCATGTGCAATTCAAAGTCTCACTGATTGTAATATGAAAGAACCTGTGAAGAAACATGGCATTGGCAAAGGTCTGATGACAGTTTGGAGGGCAACAAAACCTAATGCTGGAGACCTTCCCATTGGTTTTGGCATTGCTGACCAAGAAGTTCCTCTAGTCTCAAATTCTACAAGACAGAAAAGAATCTGTGAGAACAACAGGTCATGGAAAACAGTAAACACGAATGGAATGCCAAAAAATAAAATGCAGAATAAGAGAAATAAAGCGCAGGATAAGAGGAAACTTTCCATGCAAAGAAGAGTGGGGGAATTGAACCTATATGTGACTCAGAATCAGTCACCAAAGGAAAAATGTGAACTAGCTTTGGATAATGCAATATCTGAGGAGGGAGTTGATCGAGTTTCAATGTTAATTGATGATGAAGAGCTAGAGCTGAGGGAGTTACAAGAAGGAACTAATCTGTTTATGTGTTCAGATCATCTTGCTGCCAGTGGAATGCTTGGCTGCTCACTTTGTAAAGATGTGCTAGTGAAGTTTCCCCCAGATACTGTCAAGATGAAGAAACCTATCCATTTGCAACCTTGGGACTCCTCTCCAGAAATTGTGAAGAAATTATTTAAGGTTTTCCATTTCATTTATACATATGCTATAATTGTTGATATTTGTCCCTTCACTCTTGATGAGTTTGTTCAAGCATTTCATGATAAGGATTCAATGTTACTTGGCAAGATTCATGTGGCCCTTCTCACACTTCTTCTATCTGACATTGAAGTGGAGCTTACTAATGGGTTTTCACCCCATTTAAATAAATCATGTAACTTTCTTGCATTGCTTCACTCGGTTGAAAGTCAAGAATATTCCCTGGACTTCTGGAGAAGATCTCTAAATTCTCTTACTTGGATTGAAATACTCCGTCAAGTGCTGGTTGCTTCTGGATTTGGTTCAAAACAAGGTTCCTTACGTAGAGAGGTCCTTAGCAAGGAATTGAATCTTCTTGTAAACTATGGTCTATGCCCTGGCACATTGAAAGGTGAGTTGTTTAACATCCTCTCAGAGAGAGGAAACATTGGATGCAAAGTATCTGAGCTGGCAAAGTCAATGCAGAATGCTGAATTAAACCTTGCCAGCACAACAGAGGAACTTGAATCTTTAATATGTTCCACGCTTTCAAGTGATATTACTTTATTTGAAAAGATTTCATCAACTGCATACCGATTGCGTATGAGCACTGTTATGAAGGACGATGATGAATCTCATTCAGATACGGAGGACTCTGGTAGTGTTGATGATGAACTTAATGACACTGATGCGTGTAGCAGTGGTGATGATTTTGAAGGTGATTCAATAAACTCCAGTATAAGAAAATTGAAGCGTGCACGCAGTCATAAAAATAAAAATAATATGCTGAAAGTATACACTGAAATTGATGAGAGCCATCCAGGAGAAGTGTGGTTATTAGGACTGATGGAGAGTGAATATTCAGACTTGAACATTGAAGAAAAATTGAATGCATTGGCAGCTTTAACTGATCTTCTTTCATCTGGATCCAGCATCAGGATGAAGGATTCAACAAAAGTTTCAGCTGATTGCAATTCTAGCATCCCATTACGTGGTTCTGGAGCTAAAATAAAGAGATCAGTAGTAAAGAATCCTGGTCCATTTTGGAACCAGAAAGTACACTTGAATTCTGATCCCTGTCCAGTAGATTCCTCGTTATTAATCTCAAGACTCCATAGTCGTGAAGCTTCCTTTGAAAAGGGAAAAGGTTTATCTATTTTGCACCCCATTCAATCAGTGTTTTTGGGATCTGATCGTCGCTACAATAGATACTGGCTTTTCTTGGGCCCTTGTAATGTAGATGATCCAGGCCACAGGAGGATTTACTTTGAGTCTTCTGAAGATGGTCACTGGGAGGTTATTGATACTGAGGAGGCCTTGTGTGCCTTGTTGTCAGTTCTGGATGATAGAGGAAAACGGGAGGCTCTTCTTATTGAATCTTTGGAAAGGAGACAAACATCTCTGTGCAGATCTATGTCCATGATTAATGTTAATGGTACTGGAATGGGTTCTATGTCACATTCTGATCAATCTGAACTGGGTATGCTCACAGATGACAGTTATTCTCCCGCATCTGATGTAGACAACCTGAACCTGACTGAGATTGCTAAAGACTCTTTGCCATCAGCTGGGGCTGTGGTAATTGAAGCTGGAAAGAAAGGAGAGGAACAAATTCAGAATTGGATCCGTGTTCAAGAATTTGATTCTTGGATTTGGAATTTCTTTTATTTAGATCTCAATGTTGTAAAATATGGTAGAAGGTCTTATCTGGACTCTCTTGCCAGATGTAAGAGTTGTCATGATCTATACTGGAGAGATGAGAGACACTGTAAAATTTGCCATATGACATTTGAGCTTGATTTTGATCTAGAAGAAAGATATGCAATCCACATAGCCACATGCAGGGAGAAAGAAGGCAGCAATACACTTCCTAATCATAAAGTGTTATCATCACAGATTCAATCACTGAAAGCTGCAGTTTATGCTATTGAGTCTGTTATGCCTGAAGATGCCCTGGTTGGTGCTTGGAGGAAGTCTGCCCATAAACTATGGGTGAAACGGCTCAGGCGCACCTCAACTTTAGTGGAGCTTTTGCAGGTTCTTGCTGATTTTGTTGGTGCCATCAATAAGGACTGGTTGTTTCAATGCAAATTTCCGGATGGTGTAGTTGAAAAAATCATTGCATCTTTTGCATCTATGCCCCATACGTCATCTGCCCTTGCTCTGTGGTTAGTGAAGTTAGATGCCATAATTGCTCCGTACCTGGACAGAGTCCATCCTCTGAAGAAGCAGGGAATC 3249 0.4057 MEGCEKYIAQRDKGKNGAIVPSCACSREEFRARGGAAAAARNGSSTSNYDMAVTRNVKKKQKRKGLQELFTTDYIVNNVLREGGPPLGQDFDFLPSGPKYFTSACQEDQGSSKRRKVTFTIRRKFFDVSKSACAIQSLTDCNMKEPVKKHGIGKGLMTVWRATKPNAGDLPIGFGIADQEVPLVSNSTRQKRICENNRSWKTVNTNGMPKNKMQNKRNKAQDKRKLSMQRRVGELNLYVTQNQSPKEKCELALDNAISEEGVDRVSMLIDDEELELRELQEGTNLFMCSDHLAASGMLGCSLCKDVLVKFPPDTVKMKKPIHLQPWDSSPEIVKKLFKVFHFIYTYAIIVDICPFTLDEFVQAFHDKDSMLLGKIHVALLTLLLSDIEVELTNGFSPHLNKSCNFLALLHSVESQEYSLDFWRRSLNSLTWIEILRQVLVASGFGSKQGSLRREVLSKELNLLVNYGLCPGTLKGELFNILSERGNIGCKVSELAKSMQNAELNLASTTEELESLICSTLSSDITLFEKISSTAYRLRMSTVMKDDDESHSDTEDSGSVDDELNDTDACSSGDDFEGDSINSSIRKLKRARSHKNKNNMLKVYTEIDESHPGEVWLLGLMESEYSDLNIEEKLNALAALTDLLSSGSSIRMKDSTKVSADCNSSIPLRGSGAKIKRSVVKNPGPFWNQKVHLNSDPCPVDSSLLISRLHSREASFEKGKGLSILHPIQSVFLGSDRRYNRYWLFLGPCNVDDPGHRRIYFESSEDGHWEVIDTEEALCALLSVLDDRGKREALLIESLERRQTSLCRSMSMINVNGTGMGSMSHSDQSELGMLTDDSYSPASDVDNLNLTEIAKDSLPSAGAVVIEAGKKGEEQIQNWIRVQEFDSWIWNFFYLDLNVVKYGRRSYLDSLARCKSCHDLYWRDERHCKICHMTFELDFDLEERYAIHIATCREKEGSNTLPNHKVLSSQIQSLKAAVYAIESVMPEDALVGAWRKSAHKLWVKRLRRTSTLVELLQVLADFVGAINKDWLFQCKFPDGVVEKIIASFASMPHTSSALALWLVKLDAIIAPYLDRVHPLKKQGI 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9978g00002 1083 MobiDBLite consensus disorder prediction 552 572 - -
Mupr9978g00002 1083 PANTHER HOMEOBOX PROTEIN SIX 221 1067 - -
Mupr9978g00002 1083 SMART testlast3 330 389 IPR018501 -
Mupr9978g00002 1083 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 611 650 IPR028942 -
Mupr9978g00002 1083 Coils Coil 210 230 - -
Mupr9978g00002 1083 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 728 801 IPR028941 -
Mupr9978g00002 1083 MobiDBLite consensus disorder prediction 205 224 - -
Mupr9978g00002 1083 MobiDBLite consensus disorder prediction 543 575 - -
Mupr9978g00002 1083 Pfam DDT domain 333 386 IPR018501 -
Mupr9978g00002 1083 Coils Coil 491 518 - -
Mupr9978g00002 1083 ProSiteProfiles DDT domain profile. 330 389 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9978g00002 Mupr-Chr9978 8633 17467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9978g00002 250 1068 Homeobox Transcription Factor Family AT1G28420 26.438 4.43e-73 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mupr9978g00002 WSD 9.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9978g00002 - - gmx:100792062 1874.75