Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9969g00001 ATGGTCAGAAAGTGCTCACATTGTGGAAACATAGGTCATAATTCCAGGACCTGCGCATCTATCAGAGCAACTTTTGTAGGAGTTCGTCTCTTTGGGGTTCAACTAGACATATCGAGCTCTTCTTCTCTTTCCTTGAAGAAAAGCTTCAGCATGGATTCCTTGCCCTCATCATCGTCTCCATCTTCCTCCTTTTCTTCCTCCAGAATATCCATTGACGACCATTCTGACAAAGCCTCTATTGGGTATCTATCAGATTCAGATGGCCTCATAGTTCCAGCACAAGAGAGGAAGAAAGGAGTACCATGGACAGAAGAAGAGCACCGAACATTCCTTGTTGGACTTGAGAAGCTGGGAAAAGGAGACTGGAGGGGTATCTCTAGAAACTATGTGACTACAAGAACCCCAACGCAAGTCGCTAGCCATGCTCAGAAGTACTTTATTCGGCTTGCAACCATGAATAAGAAAAAGAGACGTTCAAGCCTTTTTGACTTGGTTGGTAGTGGCAGAACAGATCCAATTAGCAGCCCTAAGTGCAAGTCATCAGGTGATATAGTTCGTACAAAATCGAAATGTGAAATTGAGAACAATGTCACATTGTCACTTCTTGAACAAGAAAGCAAATCAGATGAGAAGAGAGATAGTGATAATAAATATTGTGAAGCTAAAGCAGGTGCAGGTGTGGCCATGTGGCTACATCCTCAGATGAAATCTTCATATAATAATATTGCAGCAGTTCCTGATCTGGAGCTCAGTCTTGCAGTCCCCAAGGGGAAGACTAAGACCCTGGAACAAACAAAATCATCCCCGGATTCCTTCCTTCTTGACCCAATTAGCGTCACTTGA 843 0.4342 MVRKCSHCGNIGHNSRTCASIRATFVGVRLFGVQLDISSSSSLSLKKSFSMDSLPSSSSPSSSFSSSRISIDDHSDKASIGYLSDSDGLIVPAQERKKGVPWTEEEHRTFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRLATMNKKKRRSSLFDLVGSGRTDPISSPKCKSSGDIVRTKSKCEIENNVTLSLLEQESKSDEKRDSDNKYCEAKAGAGVAMWLHPQMKSSYNNIAAVPDLELSLAVPKGKTKTLEQTKSSPDSFLLDPISVT 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9969g00001 280 Gene3D - 100 152 - -
Mupr9969g00001 280 PANTHER TRANSCRIPTION FACTOR KUA1 3 232 - -
Mupr9969g00001 280 CDD SANT 101 146 IPR001005 -
Mupr9969g00001 280 ProSiteProfiles SANT domain profile. 102 150 IPR017884 -
Mupr9969g00001 280 SUPERFAMILY Homeodomain-like 95 150 IPR009057 -
Mupr9969g00001 280 FunFam transcription factor MYB1R1 100 151 - -
Mupr9969g00001 280 ProSiteProfiles Myb-like domain profile. 94 146 IPR001005 -
Mupr9969g00001 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 150 IPR017930 -
Mupr9969g00001 280 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Mupr9969g00001 280 MobiDBLite consensus disorder prediction 259 280 - -
Mupr9969g00001 280 SMART sant 98 148 IPR001005 -
Mupr9969g00001 280 Pfam Myb-like DNA-binding domain 101 146 IPR001005 -
Mupr9969g00001 280 NCBIfam myb-like DNA-binding domain, SHAQKYF class 97 148 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9969g00001 Mupr-Chr9969 724 2115 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr9969g00001 Myb_DNA-binding 2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9969g00001 - - pvu:PHAVU_004G171200g 354.755