Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9960g00006 ATGGACGGCACCGTCACGGAGCTCAGTCCCTCCTCCGATGCCGCCGCACCGCTTCGCCGCAGTGTCCGCCGGAAGCTGGTTCAGTCCACGCTCTTCTCTCACAAGCCACCAGAACCCGACGAAAAGATCGGCAAAGAGGACGAACGCGACGAGGATTACTCCGACGCTGAGAAACACAAGAAGAGAAAGAAGCCCAAGGCAAAAGCCATTCCTCGAAAAAAAGGTCCCAAGAATGCCAAGCCAAAGAAAAACGCGTTGGGTACTGGAATTAAGGGGTCAACTTCGCGTCAAGTGTTGGCTGATTCCGACCAGGTTACTGCACCCGTGCACGATTTGCGGTTAGAAGCGAAATTGTCTGCTGAGGAAGATGCAAGGATATTTGCAGGACGGCAGATACATCCATTTTTCTCATTGTGGAAGGAGGGGAAGAAAGTTCAGGACATGGCTGAGTCAGGAAATAAATTATGGACAGCAGAGAGGGAGAATGAAAGGACTACCTGTGGTCCTATTCATGATGATGCCTCATCCCTTGACTGGAGAAACTGGACGTTTTTGGAGAATGCTACCTCTATGAATTATGGTCCAGAAACTTTAAATTCATCTGTTTTAGAGGGTTCTGTTGAATCCTTAAACTTTGATAAGCTTCACAGTTCTTTGGATCCATCAGGTGCTTCAATTTCTCAGAATGGCTTATCTTTAGATAGACTTTGTATACATCCAGAAAATCCGGAAGTATCACTGTCAAACTCAGCTTCACTAGCAGAGCAAACATGTCATCTGATGTGTAAAGATGCTGAAGTGGACTTGGAGGTGGATGGATCTGTTGCTGCAACTGTGCAAGCTGGCATTTTTAGGAAGTCAGATACTGAACTGAGGAGTAGATTTCTTCAAGAAAGTATGAGGTCATACTACCATAGTTGTGTAGACAAGGCGGAGGGAAGCTTATGGACATACAAATACAAGCCAACAAAGGCTGTTGAGGTATGTGGTAATGATGAATCTGTGAACTTCTTGCGCGACTGGCTACATCTTTGGCATGAAAGACGTTCTAAAAGTGGGAAGGATACCTTTGACATGGATAAAAGTGACATGCAAGATGATGATGATTATAACTGTTCTTATAGTGACTATGATTCAGAAGATATAGATGAGAAGGATTCCCTGCAGAATGTTCTTTTAATTTCAGGACCGATTGGGAGTGGCAAGTCTGCTGCAGTCTATGCTTGTGCCCAAGAGCAAGGGTTTGACATTTTAGAGCTCAATGCATCAGATTGTAGAAATGGGACTGTTGTCAGGCAGTATTTGGGTGATACTCTTTTTTGTTCACTTGGGTTCAAAAGGTTATCAAAAAACACTGCAAGTTCACAGATGAAAACTACAAAATTACCCCAAGCTCCGGCTTTGCTCAGTGGTAAAGCTACTGATGAGGTGAATGATGGGGTTGTTGAAATGATAACCATATCTGATGATGAAGCTCATAGCCCCAGTGGATCATCACGGAAGTTACTCAGCAAAAATAATGTAGTTGCATGTGATAAAGTCCAAAAGTTGATTCTAGTTGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGATGCATTGCTGCCATACAACAGATTGCTGAGACTGCAAGGGGGCCAATTATATTGACCACTAATAGTGATAATCCTGGCCTGCCAGATAATTTTGATATGCTCCATGTTTCATTCGTGTTGCCATCGCCAAAGGAGTTGCTCTGCCATTTGTACACTGTTTGTCTCACCGAAGGGGTCAACATCCATCCTCTTTTACTGGAGAAGTTTATACATTCTTGTGATGGAGATATCCGGAAATCCATTATGCATCTTCAGTTCTGGTTTCAGAGTAAAAGATTTCAAAAAGACGGAAAAGCACAAACAGGTTATGGCTCACTTCCATTTGATCTTGAGCTTGGCCATCAGATACTACCTAAGATAATGCCCTGGGATTTCCCCTCAGAGATATCCGAACTAATTGAGAAAGAAATTGCTAAATCAATAAATATAATGGAAGAAAACTCTGGAGGATTAGTTACGGAAGAGCTTCTTCACATAAATGAACGTCAAAGTGATTTAGATGTGCAGTATATGGAGACTGATTATATAGAGGCCAAGAAGGTGGAGATGATCAAGAGAAATGGATCTTTGACAGATTACAACGATCTTAAAATTCAATATTATGCAATTTCTGAATTTTCCAATTCTTCTGGTTCTCCACCTGCATCCCCTCGGCAAAATGGTCGAAGGAAACTTGTAGTAATGTCCTCTGATTCCGAGGATGAGAAGTCAAATGATGGATATCCTGTAGACATCCGTGATGAACCTAATAAGAGACAACCAATAAGAGATAATAATGGATGTACCTCTGAGTTTCAATTAAATGGAAACCGCCCCAGCACATCAGTTCGCAAATTGGTTTGTTCTGAGTTGGAGCATTCGGAGGAGGAACATTTTAAATATTCAGAGACAGCTGATGATACATGCTTAAATGAAACAAGTAAATCATTTGATATATCCCGTGTGCCAGAATCAACGTTTGTTCCCGAGACTGCAATTGAAAATGGAACAGAGACAATCTCTGGAGCATTGTCTTCTGGCCTTCTTGTTGGTCCTCCAGAAGTTTCCGTGGATAGTGAGTTGAGACCATTCACTTTCAGTATCAGAAGGCGCTTAACAAAATTGTCAGAAAATCCAGATTTGTTGGTGGATACTGAAATTATAGATTATTCTTCAAAAGAGGTTCCGCAAGATGTTCTAGATGAACATATGGAAACAATTGTTAATGTGATGGATGAGTGCAGTCGTGTGGATTTCAAACTAAAGCCAACGTTTTTTCAGTCCAATCCATTAATGGAGACAGAAACTATACAAAAATTGTGGAGAGATCTCCGTGAGCATAGGATGGATTTAAGACAGCATTCTACCTCAGAACAGCTAGGTGCTTTTCAAGTTGTTAAACTTGCTAGTGGACTGAGCAATCTAATTTCAGAAGCTGACTTATTTCATAATCGTGATATTATGGAATCTCCAACGTTCTTTTCTGGTGAAGCCACATATCATGAACAAATAATGATGTCCACTGTTGCTGAACATGGGTTTTGCTTTTACGCTAAGCTTATAGCAGATGAAGGATCAAAGTTGGGTTGTGCAAATTGTGTTGATATTACTTCTGAGATGTTGGCTTCCACCAATGATATTATGGCACTGGGGAAATTATCCGGACAGGATCTCACGATAAGCAAAGTTATCTATTCTGGAAAGGAATTAGAGTGGAACAACCCAGTAAATGATATGCAGAAGAGTAAAAACAAAGCATGTCTGTTCGAGGTCATCCAATCCATTGTCCCTGCAAGAATATTCTTGGCATTAAAAGGTGATGTATTCAATGAATATCTATCCTCATTACGCCAAATTTCAAGGTCAGAAGCTTTTCGCATTTCACAAGTTGTTGAAAAGCAGAGAAGAGGAAGGTTACGTGGTGTTCACCATTACTTGAGCACATGTACCTCGTTGTCTCCTGAAGATATATTTTTGTTGACTGAGGGTGACCTGTACAGAAAGATTTCTTCACAACACACAACATAG 3603 0.4133 MDGTVTELSPSSDAAAPLRRSVRRKLVQSTLFSHKPPEPDEKIGKEDERDEDYSDAEKHKKRKKPKAKAIPRKKGPKNAKPKKNALGTGIKGSTSRQVLADSDQVTAPVHDLRLEAKLSAEEDARIFAGRQIHPFFSLWKEGKKVQDMAESGNKLWTAERENERTTCGPIHDDASSLDWRNWTFLENATSMNYGPETLNSSVLEGSVESLNFDKLHSSLDPSGASISQNGLSLDRLCIHPENPEVSLSNSASLAEQTCHLMCKDAEVDLEVDGSVAATVQAGIFRKSDTELRSRFLQESMRSYYHSCVDKAEGSLWTYKYKPTKAVEVCGNDESVNFLRDWLHLWHERRSKSGKDTFDMDKSDMQDDDDYNCSYSDYDSEDIDEKDSLQNVLLISGPIGSGKSAAVYACAQEQGFDILELNASDCRNGTVVRQYLGDTLFCSLGFKRLSKNTASSQMKTTKLPQAPALLSGKATDEVNDGVVEMITISDDEAHSPSGSSRKLLSKNNVVACDKVQKLILVEDVDILFPEDRGCIAAIQQIAETARGPIILTTNSDNPGLPDNFDMLHVSFVLPSPKELLCHLYTVCLTEGVNIHPLLLEKFIHSCDGDIRKSIMHLQFWFQSKRFQKDGKAQTGYGSLPFDLELGHQILPKIMPWDFPSEISELIEKEIAKSINIMEENSGGLVTEELLHINERQSDLDVQYMETDYIEAKKVEMIKRNGSLTDYNDLKIQYYAISEFSNSSGSPPASPRQNGRRKLVVMSSDSEDEKSNDGYPVDIRDEPNKRQPIRDNNGCTSEFQLNGNRPSTSVRKLVCSELEHSEEEHFKYSETADDTCLNETSKSFDISRVPESTFVPETAIENGTETISGALSSGLLVGPPEVSVDSELRPFTFSIRRRLTKLSENPDLLVDTEIIDYSSKEVPQDVLDEHMETIVNVMDECSRVDFKLKPTFFQSNPLMETETIQKLWRDLREHRMDLRQHSTSEQLGAFQVVKLASGLSNLISEADLFHNRDIMESPTFFSGEATYHEQIMMSTVAEHGFCFYAKLIADEGSKLGCANCVDITSEMLASTNDIMALGKLSGQDLTISKVIYSGKELEWNNPVNDMQKSKNKACLFEVIQSIVPARIFLALKGDVFNEYLSSLRQISRSEAFRISQVVEKQRRGRLRGVHHYLSTCTSLSPEDIFLLTEGDLYRKISSQHTT 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9960g00006 1200 MobiDBLite consensus disorder prediction 1 101 - -
Mupr9960g00006 1200 MobiDBLite consensus disorder prediction 739 801 - -
Mupr9960g00006 1200 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 9 1197 IPR004582 GO:0006281
Mupr9960g00006 1200 MobiDBLite consensus disorder prediction 787 801 - -
Mupr9960g00006 1200 Gene3D - 573 634 - -
Mupr9960g00006 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 315 627 IPR027417 -
Mupr9960g00006 1200 MobiDBLite consensus disorder prediction 35 59 - -
Mupr9960g00006 1200 MobiDBLite consensus disorder prediction 759 786 - -
Mupr9960g00006 1200 MobiDBLite consensus disorder prediction 60 80 - -
Mupr9960g00006 1200 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 575 636 - -
Mupr9960g00006 1200 Gene3D - 313 563 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9960g00006 Mupr-Chr9960 18034 27082 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9960g00006 316 618 Core DNA Replication Machinery Family AT5G22010 22.713 4.23e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9960g00006 K26118 - gmx:100784209 1808.11