Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr994g00001 ATGGATAAATCAGAGCAGACTCAACAGCAGCAGCAGCAACAACAGCATGTGATGGGAGTTGCCACAGGTGCTAGCCAAATGGCCTATTCTTCTCACTACCAGACCGCTCCCATGGTGGCTTCAGGCACGCCTGCTGTAGCTGTTCCTTCCCCAACACAGGCTCCAGCTGCCTTCTCTAGTTCCGCTCACCAGCTTGCATTCCAGCAAGCACAGCATTTTCACCATCAACAGCAGCAACACCAACAACAGCAGCTTCAAATGTTCTGGTCAAACCAAATGCAAGAAATTGAGCAAACCTTTGACTTTAAAAATCACAGTCTCCCACTTGCTCGGATAAAAAAGATAATGAAAGCGGATGAAGATGTCCGCATGATTTCTGCAGAAGCTCCAGTCATATTTGCAAAAGCATGTGAGATGTTCATATTAGAGTTGACATTGCGATCTTGGATCCACACAGAAGAGAACAAGAGGAGAACACTACAAAAGAATGATATAGCAGCTGCTATTTCAAGAAATGATGTTTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAATTGAAAGAGGAAGGACTTGGAATAACCAAGGCTACTATTCCATTAGTGGGTTCTCCAGCTGATATGCCATATTACTATGTCCCTCCACAGCATCCTGTAGGGCCACCTGGGATGATCATGGGAAAGCCAGTTGATCAAGCGGCGCTGTACCCTACACAGCAGCCTCGACCTCCCATGGCCTTCATGCCATGGCCCCATACACAACCCCAGCAACAGCAGCCACCCCAACATCAACAAACAGATTCATGA 807 0.4634 MDKSEQTQQQQQQQQHVMGVATGASQMAYSSHYQTAPMVASGTPAVAVPSPTQAPAAFSSSAHQLAFQQAQHFHHQQQQHQQQQLQMFWSNQMQEIEQTFDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRNDVFDFLVDIIPRDELKEEGLGITKATIPLVGSPADMPYYYVPPQHPVGPPGMIMGKPVDQAALYPTQQPRPPMAFMPWPHTQPQQQQPPQHQQTDS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr994g00001 268 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 106 169 IPR003958 -
Mupr994g00001 268 MobiDBLite consensus disorder prediction 242 256 - -
Mupr994g00001 268 SUPERFAMILY Histone-fold 65 178 IPR009072 GO:0046982
Mupr994g00001 268 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 55 254 - -
Mupr994g00001 268 MobiDBLite consensus disorder prediction 235 268 - -
Mupr994g00001 268 Gene3D Histone, subunit A 67 184 IPR009072 GO:0046982
Mupr994g00001 268 FunFam Nuclear transcription factor Y subunit gamma 71 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr994g00001 Mupr-Chr994 6413 7219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr994g00001 85 213 CCAAT-HAP5 Transcription Factor Family AT1G56170 89.231 1.69e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mupr994g00001 CBFD_NFYB_HMF 2.3e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr994g00001 K08066 - gmx:100796987 411.379