Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9944g00001 ATGGAGTCAAAGGAGAATTTGAAAGAGGTGGGGAAGTGTTTGGATCCTCAGCTATGGCATGCGTGCGCGGGAGGGATGGTGCAAATGCCGGTGGTGAATGCTAGGGTGTTCTACTTCCCTCAGGGTCATGCTGAGCATGCATGTGGACCCGTAGATTTCAGGGCTTACCCCAAAATTCCACCTTTCATTCAATGCAGAGTGGGAGATATCAAATACATGGCTGATTCCGAAACTGACGAGGTCTACTCCAAGCTTAGGCTTCTTCCTTTGACCACCAACGATGATGATTTTGAGGATGATGGCAATGGATCTGAAACCAAAGATAAACCTCCCTCTTTTGCCAAAACCTTGACACAGTCTGATGCCAACAACGGTGGGGGTTTTTCTGTTCCGAGATATTGTGCCGAGACAATTTTCCCTCGGTTGGACTATTCCGCGGATCCTCCTGTTCAGAACATCCTTGCCAAAGATGTTCACGGCGAGACGTGGAAATTCCGGCACATTTACCGTGGCACGCCACGGCGGCATCTGCTGACAACCGGGTGGAGTACTTTTGTGAATCATAAGAAGCTTGTGGCGGGGGATTCAATTGTGTTTCTTAGGGCAGAAAATGGTGATCTGTGTGTTGGGATTAGGAGGGCTAAGAGGGGTGGTGCTGGAGGACTTGAGGCTCCTTCCGGGTGGAATTCAGCTGGGACGATTCGTTCTGCGACTTATGGAGGGTTTTCGGCGTTTTTGAAGGAGGATGATAGCCAACTCTCGAGAAATGGGTCCAATCCAAGGGGAAGGGGGAAAGTGAAATCTGAAGCAGTTATTGAAGCTGCAACTCTTGCTGCCAATATGCAGCCTTTTGAGGTTGTTTACTACCCTCGGGCTAGTACTCCCGAGTTTTGTGTCAAGGCTTCTTTAGTTAGGGCTGCTTTGCAGATTAGGTGGTGTCCTGGAATGAGGTTCAAGATGCCCTTTGAAACTGAGGACTCCTCCCGGATAAGTTGGTTTATGGGAACCATTTCTTCTGTCAACGTTGCTGATCCTAGATGGCCTGACTCTCCTTGGAGACTTCTCCAGGTTACATGGGATGAACCAGAGTTACTCCAAAATGTGAAAAGGGTGAGCCCGTGGCTGGTTGAGATTGTATCAAACATGCCTACAATCCATCTCTCCCCTTTCTCCCCACCAAGGAAGAAGCTGAGATTGCCTCAACAGACAGAATTTTCCCTTGATGGCCAGATTTCATTGCCAGCATTTCCCAGCAACTTTCTAGGTCCCAGCAATCCCTTTGGCTGTTTACCTGAAAGTAATCCTGCTGGCATGCAGGGAGCCAGGCATGCTAATTATGGCATATCCCTATCAAATGTTCACTTCAATAAACTGAACTCGGGTCTATTTCAAGCTGGTTTCCCACCACTTGATCACACTACTGCTTCACCAAAACGCAGGGTCTCCAACACCCCACCATTGCAAAAACCCACCACCAGTGACAACATCTCTTGCTTGTTATCCATGTCAACTTCCACTCAATCTTCAAACAAAGTGGATCATGTCAAGACAACCCAACTGGTGCTTTTTGGCCAAAAAATTCTCGCTAAACAGCAAATCTCTGCTGACACAGATCCTACTCATAATACTTCACCTGATGAAAATGCTGATAAAATGACCAAGCTTTCAGATGCTTACGGTTCTACTCTCCACTCACAACACTCCTCCTTCCAGTGGTACAAGGATCACCCCAAAGAAACTGTGACTAGTTTGGAGACAGGTCAATGTAAAGTTTTCTTGGAATCAGAAGATATTGGTCGGACTATAGACCTCTCACTGCTTGGGTCTTATGATGAATTGTACAGAAAGCTCGCAGATATGTTTGGCATAGAAAAATCTGCGGTGCGGAGTCACGTGCTTTACCGTGATACAACTGGCTCAGTCAAGCAAATTGGAGATCAAGAATTCAGTGACTTTGCCAAAACTGCAAGGAGGTTGGTAATTCTAATGGATTCCAGCAGCGACAGTAGAGGAACGTAG 2019 0.471 MESKENLKEVGKCLDPQLWHACAGGMVQMPVVNARVFYFPQGHAEHACGPVDFRAYPKIPPFIQCRVGDIKYMADSETDEVYSKLRLLPLTTNDDDFEDDGNGSETKDKPPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGGAGGLEAPSGWNSAGTIRSATYGGFSAFLKEDDSQLSRNGSNPRGRGKVKSEAVIEAATLAANMQPFEVVYYPRASTPEFCVKASLVRAALQIRWCPGMRFKMPFETEDSSRISWFMGTISSVNVADPRWPDSPWRLLQVTWDEPELLQNVKRVSPWLVEIVSNMPTIHLSPFSPPRKKLRLPQQTEFSLDGQISLPAFPSNFLGPSNPFGCLPESNPAGMQGARHANYGISLSNVHFNKLNSGLFQAGFPPLDHTTASPKRRVSNTPPLQKPTTSDNISCLLSMSTSTQSSNKVDHVKTTQLVLFGQKILAKQQISADTDPTHNTSPDENADKMTKLSDAYGSTLHSQHSSFQWYKDHPKETVTSLETGQCKVFLESEDIGRTIDLSLLGSYDELYRKLADMFGIEKSAVRSHVLYRDTTGSVKQIGDQEFSDFAKTARRLVILMDSSSDSRGT 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9944g00001 672 FunFam Auxin response factor 312 384 - -
Mupr9944g00001 672 ProSiteProfiles B3 DNA-binding domain profile. 113 215 IPR003340 GO:0003677
Mupr9944g00001 672 SMART B3_2 113 215 IPR003340 GO:0003677
Mupr9944g00001 672 MobiDBLite consensus disorder prediction 109 123 - -
Mupr9944g00001 672 CDD B3_DNA 111 213 IPR003340 GO:0003677
Mupr9944g00001 672 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 12 664 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr9944g00001 672 SUPERFAMILY DNA-binding pseudobarrel domain 108 215 IPR015300 -
Mupr9944g00001 672 MobiDBLite consensus disorder prediction 473 495 - -
Mupr9944g00001 672 MobiDBLite consensus disorder prediction 476 495 - -
Mupr9944g00001 672 FunFam Auxin response factor 111 215 - -
Mupr9944g00001 672 ProSiteProfiles PB1 domain profile. 586 666 IPR000270 GO:0005515
Mupr9944g00001 672 Gene3D - 311 384 - -
Mupr9944g00001 672 MobiDBLite consensus disorder prediction 93 123 - -
Mupr9944g00001 672 Pfam B3 DNA binding domain 113 214 IPR003340 GO:0003677
Mupr9944g00001 672 Gene3D - 584 669 - -
Mupr9944g00001 672 Gene3D - 111 215 IPR015300 -
Mupr9944g00001 672 Pfam Auxin response factor 274 356 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9944g00001 Mupr-Chr9944 9732 12577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9944g00001 12 669 B3 DNA Binding Superfamily AT4G30080 57.544 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr9944g00001 B3 3.5e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9944g00001 - - gmx:100791442 1103.58