Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9943g00001 ATGCACAGAGAGAGTAGGGAGGAGAAGATGTCTCACAGGAAGTTCGAACACCCAAGGCACGGGTCACTGGGATTTCTCCCCAGGAAGCGTGCTGCTCGTCACAGGGGAAAAGTGAAGGCATTCCCCAAGGATGACCCATCCAAGGCACCCAAGCTCACTGCATTCTTGGGTTACAAGGCTGGTATGACTCACATTGTTAGAGAGGTCGAGAAGCCAGGATCAAAGCTTCACAAGAAGGAAACTTGTGAGCCTGTTACAATTATCGAGACCCCTCCAATGGTTATTGTTGGTGTTGTTGGTTATGTAAAAACTCCTCGTGGTCTTCGAACATTGAACACTGTATGGACTCAGCACTTGAGTGAGGAAGTGAAACGTAGGTTCTATAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCACCAAGTACTCAAAGCAGCATGAAACTGAGGAAGGAAAGAAAAACATTGAGGCACAATTGGAGAAACTAAAGAAGTATGCTACTGTGGTCCGTGTTTTGGCTCATACCCAGATCAGGAAAATGAAAGGGTTGAAGCAGAAGAAAGCCCATCTCATGGAAATTCAGGTTAATGGTGGGACCATAGCACAGAAGGTGGACTTTGCGTGCAGTTTCTTTGAGAAACAGGTTCCTATTGATGCTGTGTTCCAGAAGGATGAGATGATTGATATCATTGGGGTGACAAAGGGTAAGGGTTATGAAGGTGTTGTTACTCGTTGGGGTGTTACCCGCCTTCCCCGGAAGACTCACAGGGGTTTGAGGAAGGTGGCATGTATTGGTGCCTGGCATCCTGCAAGAGTTTCATTCACTGTTGCCAGGGCTGGACAAAATGGATACCACCACCGAACTGAGTTGAACAAGAAGGTTTACAAGCTCGGCAAAGCTGGAGATGAGTCTCACACTGCTCTTACCGAGTTTGATAGGACTGAGAAAGACATTACCCCAATGGGTGGTTTCCCACACTATGGTATTGTGAAGGATGATTATCTGATGGTTAAGGGGTGCTGTGTTGGTCCCAAGAAAAGGGTTGTTACCTTGCGCCAATCCCTGCTTAAGCAGACATCTCGTGTTGCTCTGGAGGAGATCAAGCTCAAGTTTATTGACACCTCTTCAAAGTTTGGCCATGGCCGCTTCCAGACAACAGTTGAGAAGCAGAAGTTCTTTGGACGTCTCAAAGCATAA 1197 0.4695 MHRESREEKMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWTQHLSEEVKRRFYKNWCKSKKKAFTKYSKQHETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDFACSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHTALTEFDRTEKDITPMGGFPHYGIVKDDYLMVKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTVEKQKFFGRLKA 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9943g00001 398 SUPERFAMILY Translation proteins 13 379 IPR009000 -
Mupr9943g00001 398 FunFam 60S ribosomal protein L3 235 283 - -
Mupr9943g00001 398 ProSitePatterns Ribosomal protein L3 signature. 221 244 IPR019926 -
Mupr9943g00001 398 FunFam 60S ribosomal protein L3 53 155 - -
Mupr9943g00001 398 MobiDBLite consensus disorder prediction 1 29 - -
Mupr9943g00001 398 Pfam Ribosomal protein L3 10 379 IPR000597 GO:0003735|GO:0005840|GO:0006412
Mupr9943g00001 398 FunFam Ribosomal protein L3 274 398 - -
Mupr9943g00001 398 FunFam 60S ribosomal protein L3 92 216 - -
Mupr9943g00001 398 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 10 393 IPR045077 GO:0003735|GO:0005840|GO:0006412
Mupr9943g00001 398 FunFam 60S ribosomal protein L3 10 83 - -
Mupr9943g00001 398 Gene3D Ribosomal protein L3, domain 3 10 283 IPR044892 -
Mupr9943g00001 398 MobiDBLite consensus disorder prediction 1 23 - -
Mupr9943g00001 398 Gene3D - 92 216 - -
Mupr9943g00001 398 Gene3D Translation factors 53 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9943g00001 Mupr-Chr9943 1690 4599 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9943g00001 10 396 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 86.822 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9943g00001 K02925 K10999 gmx:100806786 770.77