Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9943g00001 ATGCACAGAGAGAGTAGGGAGGAGAAGATGTCTCACAGGAAGTTCGAACACCCAAGGCACGGGTCACTGGGATTTCTCCCCAGGAAGCGTGCTGCTCGTCACAGGGGAAAAGTGAAGGCATTCCCCAAGGATGACCCATCCAAGGCACCCAAGCTCACTGCATTCTTGGGTTACAAGGCTGGTATGACTCACATTGTTAGAGAGGTCGAGAAGCCAGGATCAAAGCTTCACAAGAAGGAAACTTGTGAGCCTGTTACAATTATCGAGACCCCTCCAATGGTTATTGTTGGTGTTGTTGGTTATGTAAAAACTCCTCGTGGTCTTCGAACATTGAACACTGTATGGACTCAGCACTTGAGTGAGGAAGTGAAACGTAGGTTCTATAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCACCAAGTACTCAAAGCAGCATGAAACTGAGGAAGGAAAGAAAAACATTGAGGCACAATTGGAGAAACTAAAGAAGTATGCTACTGTGGTCCGTGTTTTGGCTCATACCCAGATCAGGAAAATGAAAGGGTTGAAGCAGAAGAAAGCCCATCTCATGGAAATTCAGGTTAATGGTGGGACCATAGCACAGAAGGTGGACTTTGCGTGCAGTTTCTTTGAGAAACAGGTTCCTATTGATGCTGTGTTCCAGAAGGATGAGATGATTGATATCATTGGGGTGACAAAGGGTAAGGGTTATGAAGGTGTTGTTACTCGTTGGGGTGTTACCCGCCTTCCCCGGAAGACTCACAGGGGTTTGAGGAAGGTGGCATGTATTGGTGCCTGGCATCCTGCAAGAGTTTCATTCACTGTTGCCAGGGCTGGACAAAATGGATACCACCACCGAACTGAGTTGAACAAGAAGGTTTACAAGCTCGGCAAAGCTGGAGATGAGTCTCACACTGCTCTTACCGAGTTTGATAGGACTGAGAAAGACATTACCCCAATGGGTGGTTTCCCACACTATGGTATTGTGAAGGATGATTATCTGATGGTTAAGGGGTGCTGTGTTGGTCCCAAGAAAAGGGTTGTTACCTTGCGCCAATCCCTGCTTAAGCAGACATCTCGTGTTGCTCTGGAGGAGATCAAGCTCAAGTTTATTGACACCTCTTCAAAGTTTGGCCATGGCCGCTTCCAGACAACAGTTGAGAAGCAGAAGTTCTTTGGACGTCTCAAAGCATAA 1197 0.4695 MHRESREEKMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWTQHLSEEVKRRFYKNWCKSKKKAFTKYSKQHETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDFACSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHTALTEFDRTEKDITPMGGFPHYGIVKDDYLMVKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTVEKQKFFGRLKA 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9943g00001 398 SUPERFAMILY Translation proteins 13 379 IPR009000 -
Mupr9943g00001 398 FunFam 60S ribosomal protein L3 235 283 - -
Mupr9943g00001 398 ProSitePatterns Ribosomal protein L3 signature. 221 244 IPR019926 -
Mupr9943g00001 398 FunFam 60S ribosomal protein L3 53 155 - -
Mupr9943g00001 398 MobiDBLite consensus disorder prediction 1 29 - -
Mupr9943g00001 398 Pfam Ribosomal protein L3 10 379 IPR000597 GO:0003735|GO:0005840|GO:0006412
Mupr9943g00001 398 FunFam Ribosomal protein L3 274 398 - -
Mupr9943g00001 398 FunFam 60S ribosomal protein L3 92 216 - -
Mupr9943g00001 398 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 10 393 IPR045077 GO:0003735|GO:0005840|GO:0006412
Mupr9943g00001 398 FunFam 60S ribosomal protein L3 10 83 - -
Mupr9943g00001 398 Gene3D Ribosomal protein L3, domain 3 10 283 IPR044892 -
Mupr9943g00001 398 MobiDBLite consensus disorder prediction 1 23 - -
Mupr9943g00001 398 Gene3D - 92 216 - -
Mupr9943g00001 398 Gene3D Translation factors 53 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9943g00001 Mupr-Chr9943 1690 4599 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9943g00001 10 396 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 86.822 0.0 699