Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9940g00002 ATGGGAGACCTAAAGGGCATTATACACGAGCTACTACAAGGTATGGAGATGGCAAAGCAGCTCCAAGTGTATCTCCACATGCCCTCCTCGTCCCAAGAAACCCGTGACCTCTTGATCCAGAAGATCATATCCACATTTGAAAAAGCACTCGAAATGGCAAATTGGAAAGGACCAGTGCCAGCGGGTGAATCATCACAACAGCCCCCAGGAGCTGCAATCCGAATATCAGACTCACCTTTGAGCAGCAGTAGTCCCCGCAGTGAAGACTCCGATAGAGATTTGAAGGACCAGGACCAGAATGCTTCCAAAAAGAGAAACACTTTGCCAAGATGGACAAAACAGATTCGAGTTACACCAGGAATGGGGGTGGAGGGGCCTCTTGATGATGGATATAGTTGGAGAAAATATGGGCAGAAGGACATCCTTGGAGCCGTGTACCCGAGGGGCTATTACAGATGTACCCACAGAAACGTTCACGGGTGCATGGCCACAAAGCAGGTGCAAAGATCCGATGAAGACCCCACTATTTTCGAAATCACCTACCGAGGAAACCACACCTGCACGGTGGCCAACTCATCAATCCCGCTAGAAAACCAAGAACAAAGTTTGAACAACGCAAATCAACCTAACGAACTGCTTTTGAGCCTCCGAAGAGGATTGAAAGTCCAAACAGAGAACCTAGATTCCCCTGACACATTATTCGATCCATTCCGTTTCCCTTTATCAACAAACATCAAAACTGAAACCCTAGTTTTCCCACCCCCTCCGCTTGAAAACTCCTTCAGTTCCCCTTCGTATGTATCCCCTGCTACATCGGGAATAGGCCACTTTTCCATGTCTCCAAGTGGGGTTAATAGCTTTGTGGGGAACGCCAATTTGGCAACCTCTGGATCTCAGATCAGTGATATCATCCCACCTGCTACTTCACCTCCAAACTCCGCAACCGTTGCTTTAGAGTTTCCTTTTGACCACTTTGAATTTGATGGTCAGAACTTCACATTTGATAACCCGCGATTTTTCTCT 1023 0.4741 MGDLKGIIHELLQGMEMAKQLQVYLHMPSSSQETRDLLIQKIISTFEKALEMANWKGPVPAGESSQQPPGAAIRISDSPLSSSSPRSEDSDRDLKDQDQNASKKRNTLPRWTKQIRVTPGMGVEGPLDDGYSWRKYGQKDILGAVYPRGYYRCTHRNVHGCMATKQVQRSDEDPTIFEITYRGNHTCTVANSSIPLENQEQSLNNANQPNELLLSLRRGLKVQTENLDSPDTLFDPFRFPLSTNIKTETLVFPPPPLENSFSSPSYVSPATSGIGHFSMSPSGVNSFVGNANLATSGSQISDIIPPATSPPNSATVALEFPFDHFEFDGQNFTFDNPRFFS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9940g00002 341 MobiDBLite consensus disorder prediction 69 85 - -
Mupr9940g00002 341 Pfam WRKY DNA -binding domain 128 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr9940g00002 341 MobiDBLite consensus disorder prediction 86 103 - -
Mupr9940g00002 341 ProSiteProfiles WRKY domain profile. 122 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr9940g00002 341 SUPERFAMILY WRKY DNA-binding domain 126 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr9940g00002 341 MobiDBLite consensus disorder prediction 57 114 - -
Mupr9940g00002 341 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 210 IPR044810 GO:0003700
Mupr9940g00002 341 Gene3D WRKY domain 120 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr9940g00002 341 SMART WRKY_cls 127 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr9940g00002 341 FunFam WRKY transcription factor 53 113 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9940g00002 Mupr-Chr9940 7803 9057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9940g00002 5 240 WRKY Transcription Factor Family AT4G23810 40.149 8.67e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr9940g00002 WRKY 1.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9940g00002 - - gmx:100812027 531.176