Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9939g00001 ATGGGAGGTCGTTGCTCTAAACTCTCTCTCTGCTGGTGGCCTTCCCACATCGAATCAAACCTTCATGACTTGTCTGATAATGATGATGATTTGAAGAGGAATGAGAAGGATCCTTGGAGAGGGTTCAGCGAGTACAGTTTGGATCAGCTAAGAGTTGCCACGTCAGGATTCTCACCCGACAACATTGTCTCGGAGCACGGTGAGAAGGCTCCCAATGTTGTCTACAGAGGGAGGCTTCAAGATGATGATCATAAGTTGGTTGCTGTGAAGCGCTTCAACAAGTCTGCTTGGCCTGATTCTCGACAATTCCTAGAGGAGGCACGTGCAGTGGGGCAGCTAAGGAATGAGCGATTGGCTAACTTGGTTGGGTGTTGTTGTGAGGGAGAAGAGAGGTTGCTTGTGGCAGAGTTCATGCCCAATGAAACTCTCTCCAAACATCTTTTTCATTGGGAAGCTCAGCCTATGAAATGGGCAATGAGGCTGAGGGTGGCCTTGTATTTAGCACAAGCTTTGGAATACTGCAGCAGTAAAGGAAGGGCACTGTACCATGATCTTAATGCTTATAGAATTTTGTTTGATCAGGAAGGCAACCCTAGACTCTCTTGTTTTGGACTCATGAAAAACAGTAGGGATGGCAGAAGCTATAGTACAAATTTAGCCTTCACTCCACCGGAGTACTTGAGGACTGGAAGAATTACTGCTGAAAGTGTAGTTTACAGTTTTGGCACCCTATTGCTTGATCTTCTGAGTGGAAAGCATATCCCACCCAGTCATGCACTTGACCTTATACGAGGCAAAAATTTTCTGATGCTGATGGACTCATGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCACGTTGTCTACAATATGAACCTCGCGAGAGACCAAATGTTAAGTCGCTTGTGACTGCTCTAACCTCCCTTCAGAAAGAAACTTCGGTACTGTCAAATGTTTTAATGGGCATACCAGATAGGAGTCTGTCATCAAAGGAAACAGTTTCATTGACTCCTTTTGGTGATGCTTGTTCACGAAGAGACCTGACTGCAATACATGAAATTTTGGAAAAAGTGGGCTACAAGGATGATGAAGATGTTGCGAATGAGCTATCCTTCCAAATGTGGACAAATCAAATACAAGAAACTCTAAATTCTAAGAAGCAAGGCGATTCTGCTTTTCATGCTAGAGACTTCTCTACAGCCATTGACTGCTATACACAATTCATTGATGGTGGAGCCATGGTATCACCAACCATGTATGCTAGGCGCTGCTTATGCTACCTGATGAATGACATGGCACAAGAAGCACTTGGAGATGCCATGCAAGCTCAATCAATATCTCCCACCTGGCCCACTGCATACTATCTTCAAGCAGCTGCTCTCTTCAGCCTTGGCATGGACAATGATGCACAGGAAAGTCTTAAAGATGGCACAACACTGGAAACCAGGAAGTATAGAAGTTGA 1485 0.4444 MGGRCSKLSLCWWPSHIESNLHDLSDNDDDLKRNEKDPWRGFSEYSLDQLRVATSGFSPDNIVSEHGEKAPNVVYRGRLQDDDHKLVAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPNETLSKHLFHWEAQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQEGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNVKSLVTALTSLQKETSVLSNVLMGIPDRSLSSKETVSLTPFGDACSRRDLTAIHEILEKVGYKDDEDVANELSFQMWTNQIQETLNSKKQGDSAFHARDFSTAIDCYTQFIDGGAMVSPTMYARRCLCYLMNDMAQEALGDAMQAQSISPTWPTAYYLQAAALFSLGMDNDAQESLKDGTTLETRKYRS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9939g00001 494 FunFam probable serine/threonine-protein kinase At4g35230 32 137 - -
Mupr9939g00001 494 ProSiteProfiles Protein kinase domain profile. 60 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9939g00001 494 Gene3D Transferase(Phosphotransferase) domain 1 139 331 - -
Mupr9939g00001 494 FunFam probable serine/threonine-protein kinase At5g41260 139 330 - -
Mupr9939g00001 494 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 11 492 IPR045845 GO:0004672|GO:0009742
Mupr9939g00001 494 Gene3D Tetratricopeptide repeat domain 387 493 IPR011990 GO:0005515
Mupr9939g00001 494 Pfam Protein tyrosine and serine/threonine kinase 73 313 IPR001245 GO:0004672|GO:0006468
Mupr9939g00001 494 FunFam probable serine/threonine-protein kinase At4g35230 387 494 - -
Mupr9939g00001 494 SUPERFAMILY Protein kinase-like (PK-like) 42 319 IPR011009 -
Mupr9939g00001 494 Gene3D Phosphorylase Kinase; domain 1 31 137 - -
Mupr9939g00001 494 SUPERFAMILY TPR-like 391 490 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9939g00001 Mupr-Chr9939 2102 5652 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9939g00001 45 316 Glycoside Hydrolase AT3G07070 33.779 1.11e-39 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Mupr9939g00001 PK_Tyr_Ser-Thr 4.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9939g00001 - - gmx:732542 929.472