Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9928g00001 ATGGAATTGAAAGGAAGAGATCTACACAAAAAAGTGGAAACAGACATGGATTGGCATCAGAGAACAAAACTACCCCTTGTTCCTCAACCAGAGTCCTCCTTAAGCTTCTTCTACAACTATGACAACAACGTTCCATATCCAGTGGAAGTGAAACAAGCGACATTGACTGAGACAGGACAAAGGTCGGTTCCGGCAATGGACAACGGAAACAAAGAGAAGAAGAAGCGATTAACAAGTAACCAGATAGAGTTATTGGAGAGGAGTTTCCAAGAGGAGATAAAGTTGGATCCTGAAAGGAAGACGAAGCTTTCGAGGGAGCTAGGCCTCCAGCCTCGCCAAATTGCTGTTTGGTTCCAAAATAGACGTACAAGGTGGAAGGCCAAGCATCTTGAGCACTTGTATGATGTGCTTAAACACCAATATGATGTCATCTCCAACGAAAAACAGAAGCTTCAAGAAGAGGTTATGAAGTTGAAGGCAATGCTAAGTAGAGAACAAGGTTTTGGGACGCAAACATTTGGCGGTTATACAGAAATATCTGGGGAAGAAACAGTAGAAAGCACGTCGGAGGGTCTAAGGGGATCCAACAAGCCACGGGGAAAGAGTAACATTGAACAAGTTGCAGCAGATCAGGGCTATTGTTCTTTCACTGTGGAGGATTATAGCACAGTTTCACTGCCTCACTGCCACTGGCCTGTTGTGCCTTTTTAG 711 0.443 MELKGRDLHKKVETDMDWHQRTKLPLVPQPESSLSFFYNYDNNVPYPVEVKQATLTETGQRSVPAMDNGNKEKKKRLTSNQIELLERSFQEEIKLDPERKTKLSRELGLQPRQIAVWFQNRRTRWKAKHLEHLYDVLKHQYDVISNEKQKLQEEVMKLKAMLSREQGFGTQTFGGYTEISGEETVESTSEGLRGSNKPRGKSNIEQVAADQGYCSFTVEDYSTVSLPHCHWPVVPF 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9928g00001 236 Gene3D - 65 133 - -
Mupr9928g00001 236 MobiDBLite consensus disorder prediction 182 201 - -
Mupr9928g00001 236 Pfam Homeobox associated leucine zipper 128 162 IPR003106 GO:0006355|GO:0043565
Mupr9928g00001 236 ProSiteProfiles 'Homeobox' domain profile. 68 128 IPR001356 GO:0003677
Mupr9928g00001 236 SUPERFAMILY Homeodomain-like 61 128 IPR009057 -
Mupr9928g00001 236 ProSitePatterns 'Homeobox' domain signature. 103 126 IPR017970 GO:0000981|GO:0006355
Mupr9928g00001 236 CDD homeodomain 71 129 IPR001356 GO:0003677
Mupr9928g00001 236 FunFam Putative homeobox-leucine zipper protein ATHB-51 70 133 - -
Mupr9928g00001 236 Pfam Homeodomain 71 126 IPR001356 GO:0003677
Mupr9928g00001 236 Coils Coil 134 161 - -
Mupr9928g00001 236 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 67 182 IPR045224 GO:0003700
Mupr9928g00001 236 SMART HOX_1 70 132 IPR001356 GO:0003677
Mupr9928g00001 236 PRINTS Lambda-repressor HTH signature 99 108 IPR000047 GO:0003677
Mupr9928g00001 236 PRINTS Lambda-repressor HTH signature 108 124 IPR000047 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9928g00001 Mupr-Chr9928 6104 7726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9928g00001 28 158 Homeobox Transcription Factor Family AT5G03790 57.823 4.53e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr9928g00001 Homeodomain 1.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9928g00001 - - ccaj:109798071 370.163