Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr991g00009 ATGGGTGATATGTACCACTTTGACAAGAACCTCTCTTCGCAAGACGAAATCTCACTTTTTCTGCGTCAGATTCTGCTCCGTTCATCACCTTCTTCTGCTTCGCATTCCATACCCGGATCCTGCAACTCCAACGCCGTTCACCAAAACGTAAATACACACCCTTCTTTCACAGCCTCGCCGCTCCAAGATGGGAAGATCTCCACCCTTGATTCCACCGCTTCTTTTGTCATCAAGCCTCAGCCTGCTTTTGCGGCAAATGTGTCTTCTTCGTCTTTTGGAGTTAGTGAGAACGAAAATGATGACTATGATTGTGAAAGTGAGGAGGGTGTTGAGGCTTTGGCTGGAGAAGTTCCAACAAAGCCTGCTCTTTCTAGGAGTACATCTAAAAGATCAAGGGCTGCAGAAGTTCATAATTTGTCTGAGAAGCGGAGAAGGAGTAGGATCAACGAGAAAATGAAGGCTTTGCAAAATCTAATTCCAAATTCTAACAAGACGGATAAGGCTTCAATGCTCGACGAAGCTATTGAATACCTTAAACAGCTTCAGCTCCAAGTACAGATGCTGTCAATGAGAAACGGGTTGAGTTTGCATCCTATGTGCTTTCCTGAAGGGTTACAGCCTCTGCAGTTGTCTCAGATGGGTATAGAATTTAGTGAAAGAAACAGATCCACCTCTTTAAACATGTCAGCTACTCTGCCTCTGCAGCAAGAGAACCCGTTGCACTATGCATCCAAACACACTCTGCCAAATCAGCCACCGGCGCCCTATCCTCCATACATTAACAACTCAGAAACTTCTTTAGGGCCGGATATGAAACCTCTTCAACTCCAAGGAGGAGGATCTTCTGAGCCAATAGGCCGGGAAGACATTTTGCAGTACCAGCAATCAAGTGCTATTCATTCAGACACCAATACATTAGGCGGTTCTCAAGGCACCACAGTATCACTCCCTTTTGACACGCAAACATGTGATCCTAAGGACAACAACTCTTTGCAACCATGCATTGGAGGAAGAGATAAGTCAAGAGTGATCATGAGAAATAGTGAGGCCAACATTGTTGTTACACCACAGTTAAGT 1077 0.4503 MGDMYHFDKNLSSQDEISLFLRQILLRSSPSSASHSIPGSCNSNAVHQNVNTHPSFTASPLQDGKISTLDSTASFVIKPQPAFAANVSSSSFGVSENENDDYDCESEEGVEALAGEVPTKPALSRSTSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMCFPEGLQPLQLSQMGIEFSERNRSTSLNMSATLPLQQENPLHYASKHTLPNQPPAPYPPYINNSETSLGPDMKPLQLQGGGSSEPIGREDILQYQQSSAIHSDTNTLGGSQGTTVSLPFDTQTCDPKDNNSLQPCIGGRDKSRVIMRNSEANIVVTPQLS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr991g00009 359 MobiDBLite consensus disorder prediction 117 144 - -
Mupr991g00009 359 MobiDBLite consensus disorder prediction 130 144 - -
Mupr991g00009 359 Gene3D - 127 191 IPR036638 GO:0046983
Mupr991g00009 359 FunFam Basic helix-loop-helix transcription factor 127 190 - -
Mupr991g00009 359 Pfam Helix-loop-helix DNA-binding domain 136 182 IPR011598 GO:0046983
Mupr991g00009 359 Coils Coil 171 191 - -
Mupr991g00009 359 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 132 181 IPR011598 GO:0046983
Mupr991g00009 359 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 192 IPR036638 GO:0046983
Mupr991g00009 359 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 12 276 IPR031066 -
Mupr991g00009 359 CDD bHLH_AtPIF_like 132 194 IPR047265 -
Mupr991g00009 359 SMART finulus 138 187 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr991g00009 Mupr-Chr991 71978 74829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr991g00009 97 213 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 74.167 4.13e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr991g00009 HLH 4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr991g00009 - - gmx:100797351 525.783