Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr991g00007 ATGGCGGATGCAGAGCCCGTAAGCGGAAGGCGAAGGCCCAGGGGACCGGAGGCCACCGCTCGCAGCGAAGCCTTGGAGCGTCTCAAGGCTCGCCTCCGTGGCGGTCGTCGATCCGATGGCACCGGGCCCCAAATCAGGTTAGAAAACCCTATCTACGATACCATACCCGAGGAGGAGTACAACGCCCTCGTCGCCAAACGCCGCGATGAGGCGCGCTCCTTCATCGTCGACGATGAAGGTATCGGCTACGGCGACGAGGGCGAGGAGGAGGACTGGTCGCAGGCCGGATTCACCCTCTCCTCCGACGAATCCGAAGGCGAATCGGAGAGGCCAAAACGGAAGAAAGTTGAGAAGAAGGATCCTCAGCCTAAACGACCCTCTTCTTCGCTCTCCGCCGCCGCTGCCATGATGGGCGGCCAGAGATTGTCTTCCATGTTCACTTCATCCGTTTTCAAGAAAAACAGAGATGACAAAGCCTGTGACAGCATCGTCGATGATGTTATCGCTGAGTTCGCGCCCGATGAGACCGATAGACTGAGGCGTAGAAGGGCTCAAACGAATTCCTCTTCCGTCACCAACGATGCTTTGCGGATTAACAACACGTTCAGGGATAAGCCGTCTGTTGATTTGATCGGAGCTTCTTCGTTGCCGGCAAATGGTAACGTTGAGTCTGTTAAGGTTCTTGAAAGTAACGGTTTCGACCAAAATTGTGAAGCAGTTAGTGAAATTGAAGACTCGGCGCTTGTAAGTTCTGAGAATGGACAGGCACCAATGGTGGGACAAGACGATTGTGAAATTAACGAGTGTTTAGTCGAGGAGAAAGAGGTGAAGAACATTGAAATTGAAGTAAAGGCGGGTGCCAAAAAGGAGGTGTTCACTTTGAATGCGAAGGTTAAAGAAGAGGAGGACCCGGCACTTTTTGCGACTGCTGGTTGGAAGGAAGCGATAAGCGGTGCCGGTGGGGTCAATGTTGCTGATTCGAAGGATGCTTTGCAGAACCAGCAAAACTCAGAGTTTGATTTGGAGGAAGATGGATCACTGCCTTTCTATATATTAGATGCCTACGAGGAGTTTTATGGGGAAAATAGGGGTACCCTTTATCTGTTTGGGAAGGTGAAAGCAGGGGATTTGTATCAGAGTTGCTGTGTTATTGTGAAGAACATGCAAAGGTGTGTCTATGCAATACCAAGCCGTCCTTTGCATTGCACTGAAGAGATGATGAGTCTAGAGAGAGATGTCAAGGAGTCCCGCATTTCTTCTGCAGATTTCTTTAAAAAGCTGCAAAGTGCGGTATCTGATGTTAAGAATGAGATAGCACAACATCTGGTGAATTTGGAAGTTTCTAACTTCAGCATGGCCCCTGTTAAGAGGAAATATGCATTTGAACGATCTGAAATTCCAGCAGGTGAAAATTATGTGGTGAAAATCAATTATTCATTCAAGGATCCAGTACTTCCAGTAGATATCAAAGGAGAAAGTTTCTGTGCTCTCTTAGGAACTGGTTGCAGGGAGCGTAATTATATGCATTCTGGTCTAGGGCCTTCATGGCTACAAGTTTCGAAGTTTTCTACAAGCTCAGCTTCTCGAAGGGTTAGCTGGTGCAAATTTGAAGTGACTGTTGACTCTCCTAAACATATAAGAAGTTCAGCTCCTTCACAACTCACTTCTAAGATTCCTCCAGTGGTTGTTGCAGCAATAAACTTGAAAACCGCCATAAATGAAAAACAGAACATAAATGAAATTGTATCTGCATCTGTTGTCTGTTGCAATATGGTTAAGATTGACACTCCTATGTTGGCCTCAGAGTGGAAGAGACCTGGAAGGCTGACCCATTTTACTGTTATTCGTAAACTTGATGGGAATATATTTCCAATGGGATTCAATAAGGAGGTTACGGACAGAAACTCAAAAGCTGGTTCAAATGTTCTGTGTGCTGAAAGCAGTGAAAGAGCTTTGTTAAACCGCTTGATGTTAGAATTACACAAGTTGGATAGCGATGTTCTTGTTGGACATAATATTTCTGGATTTGACCTGGATGTTCTTCTCCACAGATCCCAGGCTTGCAAAGTACCAAGCAGCATGTGGTCTAAACTAGGCCGCCTCAACCGTTCTACAATGCCTAAACTTGGAAGAAGAAGCAAGATTTTTGGTTCTGGAGCAGATCCTGGTATCATGTCTTGCATTTCTGGGCGGCTTCTTTGTGATACATACTTGTGTTCCCGTGACCTATTAAAGGAGGTTAGTTATTCTTTAACTCACCTTGCAAAATCACATCTGAACAAGTTTCGGAAGGAAGTTGCTCCACATGATGTTCCAAAAATGTTCCAAACAGCAGAATCCCTAATGGAGCTTATTGAATACGGTGAAACTGATGCATGGCTGTCTATGGAACTCATGTTTTATTTAAGTATTCTTCCGCTCACACGTCAGCTGACTAATATAAGTGGTCATCTGTGGGGAAAAACTCTTCAGGGTGGTCGAGCACAGAGAGTGGAGTATCTTTTGCTGCATACTTTCCATGCAATGAAATATATCGTGCCAGACAAGTTCTCCAACCATGCAAAAGAAACAAAATTGACGAAACGCAGAGTAACTCAAGATGTTGAGGATAGCAACTTTGATGTAGATATTGATGATGCAAACTATGCCAATGATGCTTCCGAAGCTGATCATAAGAAAAGCAAAAAGGGTCCTTCATATGCCGGGGGACTGGTTTTGGAACCCAAGAAGGGTCTATATGACAAATATATATTGCTTCTTGACTTCAACAGTCTTTATCCTTCTATTATTCAGGAATACAATATCTGCTTCACAACTGTTGAAAGATCTTTGGATGGATCTTTTCCTCGTCTACCGTCTAGTAAAATAGCTGGAGTCTTGCCAGAGGTGCTGAAAAATCTGGTCGATAGGAGGAAAAAGGTAAAGTCGTGGATAAAGAATGAAAAAAAGAAGAATGAAAAAGCTGATCCTATTAGAGTTCAGCAACTAGATATTCAGCAGCAAGCCCTGAAGCTTACTGCAAACAGTATGTATGGGTGCCTGGGATTTTCCAATTCAAGATTTTATGCTAAGCCGTTAGCTGAGCTCATAACTCTACAAGGAAGGGAGATACTACAGAGTACTGTTGATCTTGTTCAGAATAACTTGAATTTAGAGGTGATCTATGGCGATACTGATTCAATAATGATTTACAGTGGGCTAGATGATATTGAGGAAGCAAATAAAATTGCTGGAAGAGTTATTCAAGAGGTCAATAAGAAGTATAGATGCTTGGAAATTGATCTTGATGGTTTATATAAAAGAATGCTGCTTCTTAAGAAAAAGAAGTATGCAGCTGTAAAGTTGCTGTTTAAAGATGGCACCCCATATGAGGTTATTGAACGTAAAGGTCTTGACATTGTTCGCCGTGACTGGAGCTTATTAGCTAAAGAATTAGGAGATTTTTGCTTGACTCAAATTTTGTCGGGAGGGTCATGTGAAGATGTAGTGGAGTCAATCCACAACTCTCTCATGAAGTTTGAGGTACAAGAAGAAATGAGGAGCGGACAAGTACCATTAGAGAAATATGTCATTACAAAGACATTGACTAAACCTCCTGAAGCTTATCCTGATGCCAAGAACCAGCCACACGTTCTTGTGGCACAAAGATTGAAGCAACAAGGTTACTCTTCTGGTTGCTCCGTTGGTGATACAATCCCTTATATAATTTGCTACGAGCAGGGTGGTAGTTCAGGCAGTGCAGCTGGCATTGCTCAACGTGCCAGACATCCTGATGAACTTAAACAAGAACAAGGGACATGGCTGATTGACATTGATTACTATTTATCACAACAGATCCATCCTGTGGTATCACGTCTTTGTGCATCAATTCAGGGTACTAGCCCAGAAAGACTGGCTGATTGTTTAGGGCTTGACTCGTCAAAGAGGCAGTTTCATCATAAATCAAGTGAAGATTTAAATGATGATCCTACAAGCTCACTCTTGCTGGTTGCTGATGATGAGGAGAGGTATCGGGGATGTGAGCCGTTGGTCTTGTCATGCCCCAGCTGCTCTGGTACATTTGACTGTCCACCCGTCTTTAAATCTATTTGTTTGTTGGGAAGTGAAAAGCAAACCAGCTTAGTCCCGGAGGAACCTGATTACAATTTCTGGCGTAAGCTGTGCTGTCCTAAATGCCCAGAAGATGTTAAAATTTCTCCTGCAATGATAGCTAATCAGGTCAAAAGGCAAGCGGAGAGGTTTGTTTCAATGTACTATAGAGGATTACTAATGTGTGATGATGAAACATGTAAGCATACAACGCGAAGTATCAGCCATCGGTTGGTTGGTGATTCTGAGAGAGGAACTGTTTGTCCAAATTATCCTCGCTGCAACGGACGTCTACTTAGAAAGTACACTGAAGCACACTTGTACAGGCAGCTCTCGTATTTTTGCCATGTGTTGGATACTGTTTCTTGTATAGAAAAGATGGAGGCAAAATCTAGAATTCCGATAGAGAAAGAGTTGATCAAAATTAGGCCGATGATTGATCTGGCAGCATCAACAGCGCAGAAGATGAGGGACCGTTGTGCCTTTGGGTGGGTGAGACTGCAGGATCTGGTAAGGGATAAGCAAGAGAACGCGTGA 4626 0.438 MADAEPVSGRRRPRGPEATARSEALERLKARLRGGRRSDGTGPQIRLENPIYDTIPEEEYNALVAKRRDEARSFIVDDEGIGYGDEGEEEDWSQAGFTLSSDESEGESERPKRKKVEKKDPQPKRPSSSLSAAAAMMGGQRLSSMFTSSVFKKNRDDKACDSIVDDVIAEFAPDETDRLRRRRAQTNSSSVTNDALRINNTFRDKPSVDLIGASSLPANGNVESVKVLESNGFDQNCEAVSEIEDSALVSSENGQAPMVGQDDCEINECLVEEKEVKNIEIEVKAGAKKEVFTLNAKVKEEEDPALFATAGWKEAISGAGGVNVADSKDALQNQQNSEFDLEEDGSLPFYILDAYEEFYGENRGTLYLFGKVKAGDLYQSCCVIVKNMQRCVYAIPSRPLHCTEEMMSLERDVKESRISSADFFKKLQSAVSDVKNEIAQHLVNLEVSNFSMAPVKRKYAFERSEIPAGENYVVKINYSFKDPVLPVDIKGESFCALLGTGCRERNYMHSGLGPSWLQVSKFSTSSASRRVSWCKFEVTVDSPKHIRSSAPSQLTSKIPPVVVAAINLKTAINEKQNINEIVSASVVCCNMVKIDTPMLASEWKRPGRLTHFTVIRKLDGNIFPMGFNKEVTDRNSKAGSNVLCAESSERALLNRLMLELHKLDSDVLVGHNISGFDLDVLLHRSQACKVPSSMWSKLGRLNRSTMPKLGRRSKIFGSGADPGIMSCISGRLLCDTYLCSRDLLKEVSYSLTHLAKSHLNKFRKEVAPHDVPKMFQTAESLMELIEYGETDAWLSMELMFYLSILPLTRQLTNISGHLWGKTLQGGRAQRVEYLLLHTFHAMKYIVPDKFSNHAKETKLTKRRVTQDVEDSNFDVDIDDANYANDASEADHKKSKKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSLDGSFPRLPSSKIAGVLPEVLKNLVDRRKKVKSWIKNEKKKNEKADPIRVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIEEANKIAGRVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKLLFKDGTPYEVIERKGLDIVRRDWSLLAKELGDFCLTQILSGGSCEDVVESIHNSLMKFEVQEEMRSGQVPLEKYVITKTLTKPPEAYPDAKNQPHVLVAQRLKQQGYSSGCSVGDTIPYIICYEQGGSSGSAAGIAQRARHPDELKQEQGTWLIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKRQFHHKSSEDLNDDPTSSLLLVADDEERYRGCEPLVLSCPSCSGTFDCPPVFKSICLLGSEKQTSLVPEEPDYNFWRKLCCPKCPEDVKISPAMIANQVKRQAERFVSMYYRGLLMCDDETCKHTTRSISHRLVGDSERGTVCPNYPRCNGRLLRKYTEAHLYRQLSYFCHVLDTVSCIEKMEAKSRIPIEKELIKIRPMIDLAASTAQKMRDRCAFGWVRLQDLVRDKQENA 1541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr991g00007 1541 Gene3D DNA Polymerase alpha, zinc finger 1331 1522 IPR038256 -
Mupr991g00007 1541 Gene3D Helix hairpin bin 958 1016 - -
Mupr991g00007 1541 Gene3D - 1131 1320 IPR042087 -
Mupr991g00007 1541 SUPERFAMILY Ribonuclease H-like 343 847 IPR012337 -
Mupr991g00007 1541 Pfam DNA polymerase family B, exonuclease domain 379 752 IPR006133 -
Mupr991g00007 1541 SMART polmehr3 559 1067 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mupr991g00007 1541 ProSitePatterns DNA polymerase family B signature. 1055 1063 IPR017964 GO:0000166|GO:0003676
Mupr991g00007 1541 Gene3D - 389 512 - -
Mupr991g00007 1541 Gene3D - 559 874 IPR036397 GO:0003676
Mupr991g00007 1541 MobiDBLite consensus disorder prediction 103 124 - -
Mupr991g00007 1541 Coils Coil 1081 1101 - -
Mupr991g00007 1541 PRINTS DNA-directed DNA-polymerase family B signature 1000 1012 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mupr991g00007 1541 PRINTS DNA-directed DNA-polymerase family B signature 917 930 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mupr991g00007 1541 PRINTS DNA-directed DNA-polymerase family B signature 1053 1061 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mupr991g00007 1541 FunFam DNA polymerase 1330 1523 - -
Mupr991g00007 1541 NCBIfam DNA polymerase (pol2) 51 1287 - -
Mupr991g00007 1541 FunFam DNA polymerase 958 1014 - -
Mupr991g00007 1541 Gene3D Palm domain of DNA polymerase 899 1111 IPR023211 -
Mupr991g00007 1541 MobiDBLite consensus disorder prediction 74 133 - -
Mupr991g00007 1541 Pfam DNA Polymerase alpha zinc finger 1332 1533 IPR015088 GO:0003887|GO:0006260
Mupr991g00007 1541 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 17 1536 - -
Mupr991g00007 1541 FunFam DNA polymerase 559 873 - -
Mupr991g00007 1541 CDD DNA_polB_alpha_exo 559 810 - -
Mupr991g00007 1541 SUPERFAMILY DNA/RNA polymerases 844 1305 IPR043502 -
Mupr991g00007 1541 MobiDBLite consensus disorder prediction 1 36 - -
Mupr991g00007 1541 FunFam DNA polymerase 1131 1320 - -
Mupr991g00007 1541 MobiDBLite consensus disorder prediction 1 50 - -
Mupr991g00007 1541 Gene3D - 349 545 - -
Mupr991g00007 1541 Pfam DNA polymerase alpha subunit p180 N terminal 25 92 IPR024647 -
Mupr991g00007 1541 CDD POLBc_alpha 893 1305 IPR045846 GO:0003887|GO:1902975
Mupr991g00007 1541 Pfam DNA polymerase family B 819 1289 IPR006134 GO:0000166|GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr991g00007 Mupr-Chr991 48981 61877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr991g00007 2 1534 Core DNA Replication Machinery Family AT5G67100 60.180 0.0 1803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr991g00007 K02320 - gmx:100798779 2619.34