Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9909g00002 ATGAAGATCCAGTGTGATGTGTGTGACAAAATGGAAGCCACAGTGTTCTGCTCAGCAGATGAAGCTGCTCTTTGCCATAGCTGTGATCGCACCATTCACCACGCCAACAAGCTTGCAACCAAACACACACGCTTCTCTCTCCACTACCCTACCTCCAATCACTTCCCTCTTTGTGATATCTGCCAAGAGCGGCGTGCATATGTATTTTGCCAAGAAGACAGGGCATTGCTATGCAGGGAATGTGAGGTTCCTATTCACAGTGCCAATGAGCATACCCAGAAACATAACAGGTTTCTTCTCACGGGTGTGAAGCTCTCTGGCACTTGTTTGGATCCTGTTTCGTCCTCCTCCAATGAAAATCTCAGCTCTTCTTGCAAGGTTGAAGACACCGTGGCTAGTGACACCGGTTCGGTTTCAACTAGCAGCATTTCTGAGTACTTGATTGAAACAATACCCGGTTACTGTTTTGAAGACCTTCTTGATGCTTCATTTGCACCTAATGGTTTCTGTAAGAATCAGAAGAACCACGATCTTGAAGTTAGGACGTGTTTGGTTGGAGTGAAGGAAATTCCAAAAGCGAACGGTTTCGAAGGGAAATGGAAACATTATGGCTGTATCGTTCCTGAAACTAGTCATCAAATGATCAAAAAATCTAGACGCTCTCGATGTTCTACTATTTATAAAAATCTGCTGGAAAATATCTTCTTTTCAATGCTAATTACCAAGAACAACCGACAGCTTTTGCATAGTTGTAATGCGACGTTGATTGATTATGATGGATAG 783 0.433 MKIQCDVCDKMEATVFCSADEAALCHSCDRTIHHANKLATKHTRFSLHYPTSNHFPLCDICQERRAYVFCQEDRALLCRECEVPIHSANEHTQKHNRFLLTGVKLSGTCLDPVSSSSNENLSSSCKVEDTVASDTGSVSTSSISEYLIETIPGYCFEDLLDASFAPNGFCKNQKNHDLEVRTCLVGVKEIPKANGFEGKWKHYGCIVPETSHQMIKKSRRSRCSTIYKNLLENIFFSMLITKNNRQLLHSCNATLIDYDG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9909g00002 260 FunFam B-box zinc finger protein 21 1 98 - -
Mupr9909g00002 260 CDD Bbox1_BBX-like 5 47 - -
Mupr9909g00002 260 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mupr9909g00002 260 CDD Bbox1_BBX-like 57 100 - -
Mupr9909g00002 260 Gene3D Classic Zinc Finger 1 100 - -
Mupr9909g00002 260 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Mupr9909g00002 260 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 196 - -
Mupr9909g00002 260 SMART bboxneu5 4 47 IPR000315 GO:0008270
Mupr9909g00002 260 SMART bboxneu5 53 100 IPR000315 GO:0008270
Mupr9909g00002 260 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Mupr9909g00002 260 Pfam B-box zinc finger 56 92 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9909g00002 Mupr-Chr9909 21727 23506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9909g00002 1 171 C2C2-CO-like Transcription Factor Family AT1G75540 48.544 4.33e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mupr9909g00002 zf-B_box 9.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9909g00002 - - gmx:100800981 301.982