Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9881g00005 ATGGCGCGCACGCCTAAACCCAAAGGCGGCTCCTCCTCTGCCACCGCCACTGCCACCGCCTTCTTCAAACCTGGCACTGCGGTGGAAGTCAGTTCCGAGGACGAAGGCTTCCGCGGCTCTTGGTTTTCTGGCACCATCATCCGCCGTCTCGCCTCCGAAAGGTTCCTAGTCGAGTACGACAACCTGATGGCGGACGAAGAAAGCTCGAAGCACTTGAGAGAAGTCCTCGGCCTCCGCCACCTCCGGCCCCTTCCTCCGGTGGAGACCGGCCGCGAATTCAAGTTTGGCGACGAGGTTGACGCGTACCACAACGACGGGTGGTGGGAGGGACACATAACCGAAGAATTGGAGAATGAGAGGTTCGCGGTGTATTTCAGAGCATCGAAGGAGCAATTGGCCTTTTCCAAGGAGCAACTCAGGCTCCATCGCGAGTGGTTCAATCACAATTGGGATAATGCGGAATTGAAGAAAGTGTTGCTGACACCCAACGTGAAGTCTGTTGAAACTGTGAAGGGGGAGGAGTTTAACGTAGGGATATTAGTTGAGGTTAGCAGTGACGAAGATGGGTTCAGAGGAGCTTGGTTTGCTGCCACTGTTGTTGAGGCAATGGGGAAGGACAAGTTCGTTGTTGAATACCATAGCCTGTTGGCTGATGATGATTCCCAGCTTTTGAAAGAGGAGGTTGATGTCCTGCACATAAGGCCTCCTCCGCCGCCGGACACCAGTGTTGCTGGTCAATTCAGTCTTCTTGATGAAGTTGATGCTCTGTACAATGATGGCTGGTGGGTCGGTGTGATTTCTAAAGTTCTTACTGATTCAAGGTCTTCTAATGAAGAACTAGAGTTTCAGCACTCCCAGTTGAGGCTGCACCAGGACTGGATTGATGGCAAATGGGTCATGCCTTGTAAGAGTAGGTATACCTTTACATACATTGCAAACAAACTCAGTTTAGGAGAGCTAGCTCTTGACATGATAGTCTTTTTTAACAAAGAGACTTCACCTCTGCAATCTCCGAGTGATAGCGTTGAAGTTGTGAACGCTGAAGAACTAGAGATTTCAACAGAGGTTAAAACATCTCAACAGGAGACCTAG 1092 0.5055 MARTPKPKGGSSSATATATAFFKPGTAVEVSSEDEGFRGSWFSGTIIRRLASERFLVEYDNLMADEESSKHLREVLGLRHLRPLPPVETGREFKFGDEVDAYHNDGWWEGHITEELENERFAVYFRASKEQLAFSKEQLRLHREWFNHNWDNAELKKVLLTPNVKSVETVKGEEFNVGILVEVSSDEDGFRGAWFAATVVEAMGKDKFVVEYHSLLADDDSQLLKEEVDVLHIRPPPPPDTSVAGQFSLLDEVDALYNDGWWVGVISKVLTDSRSSNEELEFQHSQLRLHQDWIDGKWVMPCKSRYTFTYIANKLSLGELALDMIVFFNKETSPLQSPSDSVEVVNAEELEISTEVKTSQQET 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9881g00005 363 Gene3D - 162 247 - -
Mupr9881g00005 363 CDD Tudor_Agenet_AtDUF_rpt2_4 96 141 - -
Mupr9881g00005 363 CDD Tudor_Agenet_AtDUF_rpt1_3 22 86 - -
Mupr9881g00005 363 CDD Tudor_Agenet_AtDUF_rpt1_3 175 238 - -
Mupr9881g00005 363 CDD Tudor_Agenet_AtDUF_rpt2_4 249 289 - -
Mupr9881g00005 363 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 172 312 - -
Mupr9881g00005 363 SMART agenet_At_2 91 147 IPR014002 -
Mupr9881g00005 363 SMART agenet_At_2 245 295 IPR014002 -
Mupr9881g00005 363 SMART agenet_At_2 173 241 IPR014002 -
Mupr9881g00005 363 SMART agenet_At_2 20 89 IPR014002 -
Mupr9881g00005 363 Pfam Agenet domain 25 86 IPR008395 -
Mupr9881g00005 363 Pfam Agenet domain 180 238 IPR008395 -
Mupr9881g00005 363 Pfam Agenet domain 96 147 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9881g00005 Mupr-Chr9881 24672 28622 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9881g00005 185 308 PHD Transcription Factor Family AT5G58610 26.846 5.14e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9881g00005 - - gmx:100805605 502.286