LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr9880g00001	ATGGCTGCCTTAACCCTCCTTATAGCTACACTTGTCTATCTTCATGTTTCCTTAGTTTCTGCAAACGTTGATCTGGGTTCGTCACTTTCCACCGATGAGAATGATGCGTGGAGTTCACCTTCTGGCGAATTTGCTTTCGGATTTCGCCAACTTAACAATGATACAGACCGGAACACGAAGGTGTTCATGGTTGCCATCTGGTACGACATGATTCCCGACAAGACCATTGTTTGGAGTGCAAAAACAGACTACGATCTGGCAACAGCACCAACAGGTTCACGTGTTCAGATAACATCAGAAGGGCTTTCGCTGACAAGTCCCATAGGGGATACCATATGGATGGCCCAACCAAACACCAATGTTTCCAAAGGAGCTTTGCTTGACACCGGCAACTTGGTACTCCTCAATGAAAACTCTGACTATGTTTGGCAAAGTTTTGACAATCCCACAGACACGTTGTTGCCTAACCAATCTCTCCCGCTCGATCGCATGCTAACTTCTCGATTGACGGACACCAATTACACCACTGGAAGGTTCCAACTTTATTTTGATTCTGGCAACATGTTTATGAGCCCCCTTGCCTGGCCTTCTCAACTGCGTTACCTGTCTTATTATGAAATTGATGCCTCTGGAAATGCTTCGCAATTGCTGTTCAATACATCAGGGGATATCTATGTAGAGACTACAAACGGGACTATAATCCAACCTCAAGGTACAAAATGGGTTAACTTGAATCTCGACCCCAAGGCGAATTACTACAGAGCAACGCTTGACTTTAGTGGAGTTTTAACACAGTATGCTCATCCAAGGAACACCGCTGCCCAGACAGGATGGACAGTCATCAGGTATGTTCCTGACAACATTTGCAATACAATAACCTATGAATATGGTAGCGGTTCCTGTGGCTATAACAGCTACTGCTCCATGGAAAATGATAGGCCTACTTGCAACTGCCCTTATGGGTATTCTCTGGTGGATCCAACTAATGAATTTGGTGGATGCCGACCCAATTTCACCCTCGTTTGTGGATCCGATGTTCAAGCACGGCCAGAACAACTATATGAAATGCATTTATCCCGTAATTTTAATTTTCCTCTGGGAGATTATGAAACGATACAACCTTACTCTCAAGAGCAATGCCAACAATCTTGCTTGCAGGATTGCATGTGTGCTGTGGCCATTTTAGGTGGCAACACTTGTTGGATGAAGAGATTGCCCCTTAGTAACGGAAGAGAAGTAACTGTCAATGATCAACATTTTGTCTATGTCAAAACAAGACTTAGTGGTGACTTGTATCCTTGTGCAAACTCGAAGAAAGAATATCGATCCAAGCCAATTCTTTGGGGATCACTTATTGCCTCCGTCGTCGTTAACAGTATTCTCCTGCCTACGCTTGTTTTGTTTATTCTCTTGAAACCCAAACTGAAAAGGCCTGTACCAGCTAATGCTAGTCTTTTGGAAACAAATCTGCATTCGTTTACTTACGAAGCATTGGAAGAAGCCACGTGGGGTTTTAGTGAGGAAAAAGGAAGGGGTTCCTTTGGCATTGTCTACAAAGGCCAACTAAAAGCAGCCTCTTGTAACGTGGTTGCCGTCAAGAGATTGGACAGATTGGCACCAGAACGAGAGAGAGAATTTAGGGCTGAATTGAGTTCCATTGGTAAAACCTGTCACAAAAATCTGGTAAGGTTGATTGGATTTTGTGACGAGGGTATTCATAGACTATTGGTGTACGAGTTCATGAGCAATGGTTCTCTTGCAGACATCCTATTTGGACAATCCAAACCCATGTGGGATGTAAGGGTTGGATTTGCTTTGGGGATTGCAAGAGGGTTGGTGTACTTACACGAAGAGTGTGACACTCCCATCATTCATTGCGATATAAAACCTCAAAATATACTCATAGATGAACATTTCAATGCAAAAATCTCTGACTTTGGTTTGGCCAAGTTGTTGTTGTCTGACCAGAGCAGAACCAATACCATGATCCGAGGAACTAGAGGATATGTGGCTCCTGAATGGTTCAAGAATGTTGCTGTGACGGTTAAAGTGGATGTTTACAGCTTTGGGGTAATGTTGTTGGAAATTATTTGCTGCAGAAGAAGTGTGTTGGTGATGGAATCTGGGGAGGAAGAGAAGGCATTGTTAACAGATTGGGCTTATGATTGTTTTGTGGAAGGGAGTTTACATGGTTTGGTGGATGACGATAAGGAGGCATTGTCTGATATTGGCAGGCTACAAAAGTGGGTAATGATAGCAATATGGTGCATTCAAGAGCATCCTGAAATGAGGCCAACTATGGGGATTGTCATCCAAATGATGGAAGGTTTGGTTCAAGTTCCTAATCCACCATCGCCTTTTTCCTCATATTCCATTTCTTCACTACCTGTCAAGCCCAAAATATTGAGGGACAAGTGGTAG	2421	0.4345	MAALTLLIATLVYLHVSLVSANVDLGSSLSTDENDAWSSPSGEFAFGFRQLNNDTDRNTKVFMVAIWYDMIPDKTIVWSAKTDYDLATAPTGSRVQITSEGLSLTSPIGDTIWMAQPNTNVSKGALLDTGNLVLLNENSDYVWQSFDNPTDTLLPNQSLPLDRMLTSRLTDTNYTTGRFQLYFDSGNMFMSPLAWPSQLRYLSYYEIDASGNASQLLFNTSGDIYVETTNGTIIQPQGTKWVNLNLDPKANYYRATLDFSGVLTQYAHPRNTAAQTGWTVIRYVPDNICNTITYEYGSGSCGYNSYCSMENDRPTCNCPYGYSLVDPTNEFGGCRPNFTLVCGSDVQARPEQLYEMHLSRNFNFPLGDYETIQPYSQEQCQQSCLQDCMCAVAILGGNTCWMKRLPLSNGREVTVNDQHFVYVKTRLSGDLYPCANSKKEYRSKPILWGSLIASVVVNSILLPTLVLFILLKPKLKRPVPANASLLETNLHSFTYEALEEATWGFSEEKGRGSFGIVYKGQLKAASCNVVAVKRLDRLAPEREREFRAELSSIGKTCHKNLVRLIGFCDEGIHRLLVYEFMSNGSLADILFGQSKPMWDVRVGFALGIARGLVYLHEECDTPIIHCDIKPQNILIDEHFNAKISDFGLAKLLLSDQSRTNTMIRGTRGYVAPEWFKNVAVTVKVDVYSFGVMLLEIICCRRSVLVMESGEEEKALLTDWAYDCFVEGSLHGLVDDDKEALSDIGRLQKWVMIAIWCIQEHPEMRPTMGIVIQMMEGLVQVPNPPSPFSSYSISSLPVKPKILRDKW	806

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr9880g00001	806	SMART	blect_4	28	149	IPR001480	-
	Mupr9880g00001	806	Gene3D	Transferase(Phosphotransferase) domain 1	581	780	-	-
	Mupr9880g00001	806	SUPERFAMILY	alpha-D-mannose-specific plant lectins	76	170	IPR036426	-
	Mupr9880g00001	806	FunFam	S-receptor-like serine/threonine-protein kinase	474	580	-	-
	Mupr9880g00001	806	Pfam	D-mannose binding lectin	75	163	IPR001480	-
	Mupr9880g00001	806	ProSiteProfiles	Bulb-type lectin domain profile.	22	147	IPR001480	-
	Mupr9880g00001	806	PIRSF	SRK	1	801	IPR024171	GO:0004674
	Mupr9880g00001	806	SMART	serkin_6	503	778	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr9880g00001	806	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	623	635	IPR008271	GO:0004672\|GO:0006468
	Mupr9880g00001	806	Gene3D	-	18	147	IPR036426	-
	Mupr9880g00001	806	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	28	786	-	-
	Mupr9880g00001	806	FunFam	Serine/threonine-protein kinase	150	292	-	-
	Mupr9880g00001	806	Pfam	Protein kinase domain	509	767	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr9880g00001	806	ProSiteProfiles	Protein kinase domain profile.	503	777	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr9880g00001	806	SUPERFAMILY	Protein kinase-like (PK-like)	487	774	IPR011009	-
	Mupr9880g00001	806	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	581	782	-	-
	Mupr9880g00001	806	CDD	STKc_IRAK	510	777	-	-
	Mupr9880g00001	806	Gene3D	Phosphorylase Kinase; domain 1	471	580	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr9880g00001	Mupr-Chr9880	2681	5101	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr9880g00001	427	779	Receptor kinase-like Gene Family	AT5G45780	37.978	1.35e-64	224

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Mupr9880g00001		Pkinase	3.7e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr9880g00001	-		-	gmx:100789263	1167.53