Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9876g00004 ATGACCTCATCCGAGATTAACTGGGACAGGCTAGATAAAACGAAGTTCTATGTTGTGGGAGCGGGACTCTTTACAGGTGTTACCTTGGCACTCTACCCAGTTTCTGTTGTGAAGACTAGGCTGCAGGTTGCTTCAAAGGATACTTTGGAGAGAAGTGCGTTGTCTGTTGTTAAAGGATTGCTTAAAACGGATGGCATCCCTGGTTTGTATAAAGGGTTTGGTCCAGTTATCACCGGTGCAATTCCTGCTAGAGTCATATTCCTCACTGCCTTGGAGACGACGAAGGTGGCTTCCATCCGGATGCTGGAGCCATTTAAACTATCTGAAACTAGTCAGGCTGCCTTAGCAAATGGAATTGCAGGCATGGCATCATCGCTTTTGTCACAAGCTGTGTTTGTTCCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATGACAAATATAGCGGGGGTTTGGATGTTGCTCGTAAGGTGTTAAGGTCTGATGGAATCAGGGGATTATATAGAGGATTTGGTCTATCTGTCATGACTTATGCACCATCTAGTGCTGTATGGTGGGCAAGTTATGGCTCAAGTCAACGCTTCTTATGGAGGATCATTATCACTGGCTGCTTTGGCAGATTATGGGGAGATAGAAACAGTGAGGAAGGTACTCCGAGTCTACCAAAGATTGTTTTAGTTCAGGCTACTGGTGGAGTTATTGCTGCTGCTACTGCATCCTGCATTACAACCCCCTTGGATACTATCAAGACACGGTTACAGGTGACGGGACTTGAAAAGAAAATCTCTGTAAAACAAGTTGTTAAAGACTTGATCATCGAGGATGGTTGGAAAGGTTTATATAGAGGATTAGGTCCAAGATTTTTCAGCATGTCAGCATGGGGTACTTCAATGATATTGGCATACGAATATCTGAGTAAGAAGTCTTGCTCTCTGATTACATTCTGTGTGTTTAAAATCCTGTTTGCTTATTCTGGTTTG 996 0.4378 MTSSEINWDRLDKTKFYVVGAGLFTGVTLALYPVSVVKTRLQVASKDTLERSALSVVKGLLKTDGIPGLYKGFGPVITGAIPARVIFLTALETTKVASIRMLEPFKLSETSQAALANGIAGMASSLLSQAVFVPIDVVSQKLMVQGYSGHDKYSGGLDVARKVLRSDGIRGLYRGFGLSVMTYAPSSAVWWASYGSSQRFLWRIIITGCFGRLWGDRNSEEGTPSLPKIVLVQATGGVIAAATASCITTPLDTIKTRLQVTGLEKKISVKQVVKDLIIEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLSKKSCSLITFCVFKILFAYSGL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9876g00004 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 313 IPR018108 -
Mupr9876g00004 332 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 4 313 - -
Mupr9876g00004 332 Gene3D Mitochondrial carrier domain 17 316 IPR023395 -
Mupr9876g00004 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
Mupr9876g00004 332 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Mupr9876g00004 332 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085
Mupr9876g00004 332 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085
Mupr9876g00004 332 PRINTS Mitochondrial carrier protein signature 127 145 IPR002067 GO:0055085
Mupr9876g00004 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 97 IPR018108 -
Mupr9876g00004 332 SUPERFAMILY Mitochondrial carrier 9 310 IPR023395 -
Mupr9876g00004 332 Pfam Mitochondrial carrier protein 232 312 IPR018108 -
Mupr9876g00004 332 Pfam Mitochondrial carrier protein 114 202 IPR018108 -
Mupr9876g00004 332 Pfam Mitochondrial carrier protein 21 96 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9876g00004 Mupr-Chr9876 22925 28117 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9876g00004 6 317 Chloroplast and Mitochondria Gene Families AT5G15640 71.565 4.28e-159 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9876g00004 K15121 - gmx:100819519 521.161