Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9876g00002 TCGCTCCCACGATTCGATCCTTCCTTGAACCCCGTCCATGCATTCTGCTTTTGCTTCTGCTCTCTTGCACCTGCTTCACTGCAACAGCTTGTGGTGACTTTTCCTGTTGATGGTGCCAGTGGTTTTAGTGGGAATATGACGTTTGGATTCCTTCAAGCTTATGATCCACTTGATCCAAATGGAAATATCACAATCAAATGGGATATTATAAGTTGGACACCTGATGGTTATGTTTTAGGCACACCTTTTTTGATGGATCTGCATGTTCACATCAGCTGCATCTCATATGTTCCATTAGTTATTTACATGTCTAAGAAACAATTGAATGGACAGGCTGTTGTTACAATGAACAACTTCCAACAATATCGTCACATCTCAGCACCTGGGTGGTCGCTAGGGTGGACATGGGCAAAGAAGGAGGTAATATGGGCCATGGTGGGAGGGCAGACCACTGAACAAGGGGATTGCTCAAAATATAAGGGAAACGTTCCACATTGTTGTAAAAAGAACCCAACAGTTGTGGATTTACTCCCCGGAACACCTTACAATCAACAAATTGCAAACTGCTGCAAAGGTGGTATACTCAGCTCATGGGTGCAGGATCAATCCAAGGCGGTTGCAGCATTTCAAGTCAGTGTAGGGAGTGCTGGTACCACTAACAAAACTGTCAAACTGCCACAAAATTTCACCTTGAAAGCACCAGGACCTGGTTATACATGTGGGCCGGCAAAAATTGTGAATCCAACTCAATTCATACAACCAGACAAAAGGAGAGTTACCCAAGCACTCATGACATGGAATGTGACATGCACATATTCACAATTTCTTGCTCAGGGAACACCCACTTGCTGCGTCTCGCTCTCATCTTTCTATAATGATACCGTTGTACCCTGCCCAACATGTGCATGTGGCTGCCAGGCAAACTCATCTCAATCAGGGCAATGTGTAGATCCAGATTCACCACATTTGGAATCAGTTGTTTCCAACCCTGGACCTGGAACGAGTAGTATCACACCATTGGTTCGATGTACTCGTCATATGTGCCCAATCCGAGTTCACTGGCACGTTAAGCTTAACTACAAGGAGTACTGGCGCGTGAAGGTCACTATTACTAATTTCAATTACAGGATGAATTATTCTGATTGGAACTTGGTTATTCAACATCCAAATTTCGACAATCTGACCCAGCTTTTCAGTTTCAACTACGAATCAATAACTCCCTATGGGTCAATAAATGATACAGCAATGCTTTGGGGAGTTAAGTTCTTCAATGATTTTCTCATGCAAGCTGGCCCTGTTGGTAATGTACAGTCAGAGCTACTATTCAGAAAGGATAAATCAACTTTCACTTTTGACAAGGGTTGGGCCTTCCCTCGGAGAGTCTATTTCAATGGTGACATCTGCGTGATGCCATCACCCGATGCTTATCCTTGGTTACCTAATGCTGCTTCCAGGCAAGAGGTTTCCTTATTTGCTTTGGTGATGACCTCTTTGGTAGCCTTGGTGTTCTATGCATATGCTTAA 1524 0.4377 SLPRFDPSLNPVHAFCFCFCSLAPASLQQLVVTFPVDGASGFSGNMTFGFLQAYDPLDPNGNITIKWDIISWTPDGYVLGTPFLMDLHVHISCISYVPLVIYMSKKQLNGQAVVTMNNFQQYRHISAPGWSLGWTWAKKEVIWAMVGGQTTEQGDCSKYKGNVPHCCKKNPTVVDLLPGTPYNQQIANCCKGGILSSWVQDQSKAVAAFQVSVGSAGTTNKTVKLPQNFTLKAPGPGYTCGPAKIVNPTQFIQPDKRRVTQALMTWNVTCTYSQFLAQGTPTCCVSLSSFYNDTVVPCPTCACGCQANSSQSGQCVDPDSPHLESVVSNPGPGTSSITPLVRCTRHMCPIRVHWHVKLNYKEYWRVKVTITNFNYRMNYSDWNLVIQHPNFDNLTQLFSFNYESITPYGSINDTAMLWGVKFFNDFLMQAGPVGNVQSELLFRKDKSTFTFDKGWAFPRRVYFNGDICVMPSPDAYPWLPNAASRQEVSLFALVMTSLVALVFYAYA 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9876g00002 507 PIRSF COBRA 30 92 IPR006918 GO:0010215|GO:0016020
Mupr9876g00002 507 PIRSF COBRA 100 507 IPR006918 GO:0010215|GO:0016020
Mupr9876g00002 507 PANTHER PROTEIN COBRA 47 497 IPR006918 GO:0010215|GO:0016020
Mupr9876g00002 507 Pfam COBRA-like protein 112 273 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9876g00002 Mupr-Chr9876 7128 11459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9876g00002 52 502 COBRA Gene Family AT3G02210 69.248 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9876g00002 - - gmx:100815926 828.935