Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9875g00013 TGGGCTAACAGGCGTAGTGTGAAATGGTTACCCATATTGATTACTGAGGAGTGCGCGGGAAACAGTTGGTTCTCTCATTTCTCATTCTTCTGCCGTCACACACCACTCTTCCATTTCGTTTTCTCTGCGAATTTCTACACAATCCAAATGGGTATTAAGGGTTTGACCAAGCTTTTATCGGACAATGCCCCAAAGTCCATGAAGGAGAGCAAATTCGAGAGCTACTTTGGTCGTAAGATCGCCATTGACGCTAGCATGAGCATTTACCAGTTCCTTATTGTCGTTGGAAGAAGCGGAACTGAAATGCTCACTAACGAGGCCGGTGAAGTTACCAGTCATTTGCAAGGGATGTTTTCGCGGACAATCAGACTTCTAGAATCTGGGATGAAGCCAGTATATGTTTTTGATGGGAAACCACCAGATTTGAAGAAACAAGAGCTGGCAAAACGTTACTCCAAGAGGGCTGAGGCTACTGAGGATTTGTCAGAAGCTTTAGAGACTGCCAGTAAGGAAGACATTGAAAAACTCAGTAAACGGACAGTGAAGGTGACAAAGCAGCACAATGAGGATTGCAAAAAACTTTTAAGACTCATGGGAGTGCCTGTTGTTGAGGCACCTTCAGAAGCAGAGGCTCAGTGTGCTGCTCTTTGCAAAGCTGGAAAGGCAAGTTCATATCTCGTTTATGCAGTGGCTTCTGAAGACATGGATTCATTAACATTTGGAGCTCCTAAATTTCTTCGCCACCTAATGGATCCTAGCTCAAAAAAAATTCCAGTGATGGAGTTTGAAGTTGCAAAGATTTTGGAGGAGCTAAATATGACCATGGACCAATTTATTGATTTATGCATTCTTTCTGGCTGTGATTATTGTGACAGCATTCGAGGGATTGGGGGACAGACAGCTTTGAAACTCATACGTCAACATGGCTCTATCGAAAATATACTGGAGAACATAAACAGAGAGAGGTACCAGATACCAGATGATTGGCCATATCAGGAGGCTCGTAGGCTTTTTAAAGAACCAATGGTCATAACTGATGAAGAGGAACTTAACATTAAGTGGTCTGCTCCAGATGAAGAGGGGTTAATAACATTTCTGGTAAATGAGAATGGCTTCAACAGTGATAGGGTGACGAAGGCAATAGAAAAAATTAAAGCAGCAAAGAACAAGTCATCACAAGGCCGATTGGAATCATTTTTTAAGCCAGCAGCAAATCCATCTGTGCCTATCAAACGCAAGGAAATCAAATGCATGCTTAGATCTTTCAAACCAGCAATTGAGCATAAGATGTTCTCTCTGCAACCTTCTAACTGGTCAAGGCCCATGGAAACACCAGTGAATAATGCTAAAGAGACTCACAAAAAGGCCAAGTCCGGTGGC 1380 0.4283 WANRRSVKWLPILITEECAGNSWFSHFSFFCRHTPLFHFVFSANFYTIQMGIKGLTKLLSDNAPKSMKESKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFSRTIRLLESGMKPVYVFDGKPPDLKKQELAKRYSKRAEATEDLSEALETASKEDIEKLSKRTVKVTKQHNEDCKKLLRLMGVPVVEAPSEAEAQCAALCKAGKASSYLVYAVASEDMDSLTFGAPKFLRHLMDPSSKKIPVMEFEVAKILEELNMTMDQFIDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINRERYQIPDDWPYQEARRLFKEPMVITDEEELNIKWSAPDEEGLITFLVNENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPAANPSVPIKRKEIKCMLRSFKPAIEHKMFSLQPSNWSRPMETPVNNAKETHKKAKSGG 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9875g00013 460 SMART 53exo3 78 360 IPR002421 GO:0003677
Mupr9875g00013 460 Gene3D - 277 340 - -
Mupr9875g00013 460 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 273 407 IPR036279 -
Mupr9875g00013 460 ProSitePatterns XPG protein signature 2. 199 213 IPR019974 GO:0016788
Mupr9875g00013 460 Pfam XPG N-terminal domain 50 157 IPR006085 GO:0004518
Mupr9875g00013 460 Coils Coil 148 168 - -
Mupr9875g00013 460 FunFam Flap endonuclease 1 273 340 - -
Mupr9875g00013 460 SMART xpgineu 196 273 IPR006086 GO:0004518
Mupr9875g00013 460 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 50 445 IPR006084 -
Mupr9875g00013 460 MobiDBLite consensus disorder prediction 435 460 - -
Mupr9875g00013 460 CDD PIN_FEN1 53 386 - -
Mupr9875g00013 460 Gene3D - 59 276 - -
Mupr9875g00013 460 Pfam XPG I-region 199 288 IPR006086 GO:0004518
Mupr9875g00013 460 FunFam Flap endonuclease 1 59 276 - -
Mupr9875g00013 460 Hamap Flap endonuclease 1 [fen]. 50 401 IPR023426 GO:0016788
Mupr9875g00013 460 SMART xpgn3 50 157 IPR006085 GO:0004518
Mupr9875g00013 460 SMART HhH_4 275 308 IPR008918 GO:0003677|GO:0003824
Mupr9875g00013 460 CDD H3TH_FEN1-Euk 276 344 - -
Mupr9875g00013 460 SUPERFAMILY PIN domain-like 51 288 IPR029060 -
Mupr9875g00013 460 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 278 293 IPR006084 -
Mupr9875g00013 460 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 195 212 IPR006084 -
Mupr9875g00013 460 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 131 150 IPR006084 -
Mupr9875g00013 460 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 77 91 IPR006084 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9875g00013 50 438 Core DNA Replication Machinery Family AT5G26680 83.033 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9875g00013 K04799 - gmx:100792878 681.789