Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9872g00003 ATGTCTTCCTTCAGTACCTTTAGTTTAAACCCCGACTTTGAGATCGGTGAGGCGAGGTATATGCTCGATGATGATTACCGTGAATTGCCTCGGGAAATTACAATGAACAAGAGAATCTTCGAAGTGTTTTTGAGTTTCAGAGGAGAAGACACGCGCGCTTCTTTCGTTTCACATCTCCACGCCTCTCTTCGGAACGCGGGAATCATTGTTTTCATGGATGACCACTCACTTCCAAGGGGAGATGAAATTTCACACTCGCTTTCTCGAGCAATCGAGCAGTCTGAATGTAGTGTAGTTGTATTCTCAAGGAATTACGCAGAGTCGGGATGGTGTATGAAAGAGTTGGAGAAAATAATGAAGTGCAACAGAACCATAGGGCAGGTAGTTGTGCCTGTGTTCTATGATGTTAATCCCTCCGATGTACGTTATCAAACGGGCGAGTTTGGAAAAGGATTTGAAAAGCTTCAGACGAGGATTTCAACAAAGCGGGAGATGTCACGGTATAGGCGGATTCGGTCAAACAAATTAAATAGGGACCTCGAGAGGGAGAGGAAGAGTAAGATACTTCTTGAGGCTGCTGCCTTAGCGGGGCATGTAGTCCCAAATTTCAGGAACGAAAGTGAGGCTATAAAAAATATTGTTGAAAATGTTACTCGTTTATTAGATAAGACAGAATTGTTCATTGCCCATAATCCAGTGGGAGTAGAATCTCGAGTACAAGATATAATTCATTTGTTAGATCACAAATCATCAAATGATGTTCTACTACTAGGGATATGGGGAATGGGAGGCATTGGTAAAACAACCCTTGCAAAAGCCATTTACAATAAGATTGGACGCAATTTTGAGGGAAGGAGCTTCCTTGCACATATTAGGGAAGTTTGGGGGCAATACACTGGCAGAGTCCATTTACAAGAACAACTTCTGTTTGATATCTACAAAGGAAAAAAAATAGTGTTACCTAACATTGAATTAGGAAAAAATGTATTAAAGAAAAGACTTCGTCAAAAAAAAGTACTTCTTGTACTTGATGATGTGAATGAATTAGACCAATTGAATGCTTTATGTGGGAGTCAGACATGGTTTGGTTCTGGGAGTAGAATAATCATCACAACCAGAGATAAAGATGTATTTAGAGGGAAGAAAGTTAACAAAATATATAAGATGAAAGAAATGGATGAAGGTGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCAAGTCCTATAGAAGATTTTGTCGAACTTTCTACAGATGTAATTAGATATTCCAGTGGATTACCACTAGCTCTTGAAGTCCTCGGGTCTTATTTGTTTGATATGAAGGAAACAGAGTGGAAGTGTACATTGGAGAAACTCAAGAGAATTCCTAATGATCAAGTACAGAAGAAGTTAAAAATAAGCTATGATGGTTTAAGTGATGATACAGAGAGAGAAATATTCCTTGATATAGCTTGTTTCTTCATTGGAATGGACCGAAATGATGTTATACATATATTGAATGATTGTGGACTTTTCGCAGAGAATGGAATACGTATCCTTGTAGAGCGAAGCCTTGTAATTGTTGATGAGAAGAACAAACTTGGAATGCATGATTTGCTACGAGACATGGGAAGAGAAATCATTCGTGCAAAATCACCAAAGGAGCCTGAGGAGCGTAGCAGGTTATGGTTTGAGGAGGATGTGCTTGAT 1698 0.3922 MSSFSTFSLNPDFEIGEARYMLDDDYRELPREITMNKRIFEVFLSFRGEDTRASFVSHLHASLRNAGIIVFMDDHSLPRGDEISHSLSRAIEQSECSVVVFSRNYAESGWCMKELEKIMKCNRTIGQVVVPVFYDVNPSDVRYQTGEFGKGFEKLQTRISTKREMSRYRRIRSNKLNRDLERERKSKILLEAAALAGHVVPNFRNESEAIKNIVENVTRLLDKTELFIAHNPVGVESRVQDIIHLLDHKSSNDVLLLGIWGMGGIGKTTLAKAIYNKIGRNFEGRSFLAHIREVWGQYTGRVHLQEQLLFDIYKGKKIVLPNIELGKNVLKKRLRQKKVLLVLDDVNELDQLNALCGSQTWFGSGSRIIITTRDKDVFRGKKVNKIYKMKEMDEGESIELFSWHAFKQASPIEDFVELSTDVIRYSSGLPLALEVLGSYLFDMKETEWKCTLEKLKRIPNDQVQKKLKISYDGLSDDTEREIFLDIACFFIGMDRNDVIHILNDCGLFAENGIRILVERSLVIVDEKNKLGMHDLLRDMGREIIRAKSPKEPEERSRLWFEEDVLD 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9872g00003 566 SUPERFAMILY "Winged helix" DNA-binding domain 462 564 IPR036390 -
Mupr9872g00003 566 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 41 563 IPR044974 GO:0006952
Mupr9872g00003 566 SMART till_3 39 175 IPR000157 GO:0007165
Mupr9872g00003 566 Gene3D - 391 475 IPR042197 -
Mupr9872g00003 566 Pfam TIR domain 40 217 IPR000157 GO:0007165
Mupr9872g00003 566 ProSiteProfiles TIR domain profile. 38 221 IPR000157 GO:0007165
Mupr9872g00003 566 Gene3D - 218 386 IPR027417 -
Mupr9872g00003 566 PRINTS Disease resistance protein signature 256 271 - -
Mupr9872g00003 566 PRINTS Disease resistance protein signature 333 347 - -
Mupr9872g00003 566 PRINTS Disease resistance protein signature 426 440 - -
Mupr9872g00003 566 Gene3D - 38 217 IPR035897 -
Mupr9872g00003 566 Pfam NB-ARC domain 236 471 IPR002182 GO:0043531
Mupr9872g00003 566 FunFam Disease resistance protein (TIR-NBS-LRR class) 36 223 - -
Mupr9872g00003 566 SUPERFAMILY Toll/Interleukin receptor TIR domain 32 156 IPR035897 -
Mupr9872g00003 566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 486 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9872g00003 Mupr-Chr9872 13411 16483 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9872g00003 233 559 WRKY Transcription Factor Family AT5G45050 38.110 1.36e-57 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9872g00003 - - gmx:100808685 751.125