Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9870g00006 ATGGCTGTGGAGAACCAAAGGGGTAATTTGGGGAATGAAGATGGGGGCAGTGACCCTTTTCCTGTGGGTATGCGTGTTCTTGCTGTGGATGACGACCCAATTTGCCTCAAGGTGTTGGAGAATCTGCTTCGCAAATGCCAGTATCAGGTTACTACAACTAACCAGGCGGTTGAGGCGCTGAAAATGTTGAGGGATAACAGAAATAAGTTTGACCTTGTTATTAGCGATGTGAATATGCCTGACATGGATGGATTCAAGCTCCTTGAGTTGGTGGGACTTGAAATGGACCTACCTGTCATCATGTTGTCAGCACACAGTGATACAAAGCTGGTGATGAATGGCATTACACATGGTGCATGTGACTATTTGCTGAAACCCGTTCGAATTGAAGAGCTGAAGAACATATGGCAACATGTAGTCCGAAGAAAGAATTTTGATTGCAAGGATCAGAATAAAGCATCCAATGAGGAGAAGGCTCCTAATATTGCTGGGGAAGGTAGTCAAGGCCTAAGATCAGAGAACAGTACTGACCAGAATAGAAGGGTTGGTAAGAAAAGGAAGGACCAAAGTGAGGAAGAAGAAGAAGATGAGGAAGGGAATGAAGATGATGAGGACCCCTCAGCACAGAAGAAACCTCGTGTAGTTTGGTCTGTTGAGCTGCATAGAAAATTTGTTGCTGCAGTTAATCAACTTGGTCTAGATAAGGCTGTTCCCAAGAAAATACTAGATCTGATGAATGTTGAAGGGCTTACAAGGGAAAATGTTGCAAGCCATCTACAGAAGTATAGACTCTATCTGAAAAAGGCAGCCCAGCAAGCTAACATGGTTGCTGCATTGGGTGGTAGTGATTCTTACCTACGCATGGGTTCAATAGAAGGATTTGGAGATTTTTGCACCTCATCAGGATCTGGAAGGATCTCAAGCTCTACATTACCATCGTATGCAACTAGTGGAATTTTTGGTAGGCTGAACTCTCCAGCTGGCTTGAATATGAGAGGAATTAATTCTTCTACACTTATCCGGCCTGTTCAGTCTCAAAACATCAATGGCTCCTTAAACACACTTGGAAATATTCCGCCGTCCATGTTTCCTGCAAATCAAAGCTCAAGTTTATTACAGGGCATTCCAACATCAGTTGAGCTTAACCAATCTAAGCAAAGCAACTGTACAACTGGAATATCGCAGTTAAACCAAATTGATTCAAGTGGATTTACAGTTGCCTCTGGCTTCCCAGACAGTAGGACTCCAGTTAATGGTGCAAACAATTCTCTACCATGTGTGTCAAGTAATCATATTATGTTACAAGGAAATCCACAGCAAACACATAGCCCGGGAGCATTTAGAAATCAGTCTTCTGTTAGAGCGGCTTCTTTGAGTGCAGATTCTTTTGACGTGGGCATGTGTGGTTCTTCTAATTTGTTGGATTATAATCGGTGTAATGAAAACTGGCAGAGTGCGGCTCAGTTGTCTAAATTTTCTGCCAATTCTTTGCCATGTGAGGCTTTCCCCACAAGCATAAATGTTTCCAACTCAAGTACACATATTGGTAACAGTCCGGTTGATTTTTCTCCTAGAATTGCAATTCCTGTTTCTTTGGAGGATGCCAGAAATGAGCTGCGATGCCAAGAAGGCTTGATGGGGAATATTATACAGCCGTCAAGCTACACGCCACAACAAAGGTGGGAAGAACATAAACTGGATTATAACCAAAACATGAGTCGTCCCTTCAATCCTGGAAATTCACATGCTTCTTCCAGTTCTGTGGGGCTTGGTTTAAACCAAAATAATACCATTTGCAGCAATAGAGTTGATGCATCTTTAGTTGGGCAACTAAATGGAGCATCACCATCAATCAGCAGGTGCACTGAAGTTGAGAAATTCTCTTCTGACATTCGACTGAAGTCAAATGAGGCCTACATTTTGGAGCAAATGAAGTCCCAAGATGGATTTATGCAGAATACTTTTGGGACCTTGGATGACATAATGGGTGCAATGGTCAAAAGGGAGCAAAATGAGTTGACGTTGTTGGATGGAGAAATGGGATTTGATGCCTATCCCGTTGGATCATGTAACTGA 2076 0.4268 MAVENQRGNLGNEDGGSDPFPVGMRVLAVDDDPICLKVLENLLRKCQYQVTTTNQAVEALKMLRDNRNKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTKLVMNGITHGACDYLLKPVRIEELKNIWQHVVRRKNFDCKDQNKASNEEKAPNIAGEGSQGLRSENSTDQNRRVGKKRKDQSEEEEEDEEGNEDDEDPSAQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKKAAQQANMVAALGGSDSYLRMGSIEGFGDFCTSSGSGRISSSTLPSYATSGIFGRLNSPAGLNMRGINSSTLIRPVQSQNINGSLNTLGNIPPSMFPANQSSSLLQGIPTSVELNQSKQSNCTTGISQLNQIDSSGFTVASGFPDSRTPVNGANNSLPCVSSNHIMLQGNPQQTHSPGAFRNQSSVRAASLSADSFDVGMCGSSNLLDYNRCNENWQSAAQLSKFSANSLPCEAFPTSINVSNSSTHIGNSPVDFSPRIAIPVSLEDARNELRCQEGLMGNIIQPSSYTPQQRWEEHKLDYNQNMSRPFNPGNSHASSSSVGLGLNQNNTICSNRVDASLVGQLNGASPSISRCTEVEKFSSDIRLKSNEAYILEQMKSQDGFMQNTFGTLDDIMGAMVKREQNELTLLDGEMGFDAYPVGSCN 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9870g00006 691 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Mupr9870g00006 691 SMART REC_2 24 136 IPR001789 GO:0000160
Mupr9870g00006 691 NCBIfam myb-like DNA-binding domain, SHAQKYF class 211 264 IPR006447 GO:0003677
Mupr9870g00006 691 SUPERFAMILY CheY-like 23 145 IPR011006 -
Mupr9870g00006 691 Gene3D - 23 160 - -
Mupr9870g00006 691 Gene3D - 207 269 - -
Mupr9870g00006 691 SUPERFAMILY Homeodomain-like 209 268 IPR009057 -
Mupr9870g00006 691 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 267 IPR017930 -
Mupr9870g00006 691 MobiDBLite consensus disorder prediction 177 191 - -
Mupr9870g00006 691 FunFam Two-component response regulator 207 270 - -
Mupr9870g00006 691 CDD REC_typeB_ARR-like 26 140 - -
Mupr9870g00006 691 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 385 IPR045279 GO:0009736
Mupr9870g00006 691 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Mupr9870g00006 691 PIRSF RR_ARR_type-B 1 691 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mupr9870g00006 691 MobiDBLite consensus disorder prediction 150 210 - -
Mupr9870g00006 691 Pfam Myb-like DNA-binding domain 213 263 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9870g00006 Mupr-Chr9870 27242 32491 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9870g00006 18 441 Response Regulator Gene Family AT2G25180 51.991 1.15e-126 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mupr9870g00006 Response_reg 1.5e-25 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9870g00006 K14491 - gmx:100776075 1190.64