Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9842g00003 ATGTTGGAGGCAGAAGCCACAGCCACGTGGGCTCGCACGTGTGACACGTGCCGCTCCGCCCCCTCCACCCTCTTCTGCCGCGCACACTCCGCCTACCTCTGCGCCGCGTGCGACGCTCGACTCCACCCCGCCGCCGCCGCCTCGTGGCACGAGCGCGTCTGGGTGTGCGAGGCGTGCGAGCGAGCCCCGGCGGCGTTCCTCTGCAAGGCCGACGCCGCCTCCCTCTGCTCCTCCTGCGACGCCGACATCCACTCCGCCAACCCCCTGGCCGGCCGCCACCACCGCATCCCCGTTCTCCCCATCTCCGGCGCCGGCCCCCACGCTGACGTGGCAGACGACGACGACGACGCTGCTGACGTGGATGACGAAGACGAAACTGCCTCGTGGCTCTTGCTGAACCCTCTCAAGAGTGGTGGTGTCCCTAACAACAACAACAATAATGGTTTCTTGTATAGTGGTGAAGTTGATGAGTACTTGGACCTTGTTGATAACTGTAACTCTTGTGGTGACAATAACCACTTCACTGCCACTGCTACTACCACTGATCATTACACTCAGCACCAACATTTTGGTGATGTTTCTCATCAGAAGAGTTACGCTGGGGATAGTGTAGTTCCGGTTCAGCACCACCACCATTTTCAGCTTGGCCTCGACTTCGACAACTCCAAACCTGCCTTCAGTTACAATGGTTCCGTTAGTCAAAGTGTTTCAGTTTCATCAATGGATGTTGGTATTGTACCTGAATCAACAATGAGGGATGTCTCAATTGGCCTTTCAAGACCCCCGAAAGGGACAATTGACCTATTTTCTGGACCTCCCATTCAGATGCCTTCCCATCTTACTCCAATGGATAGGGAGGCCAGAGTCCTAAGGTATAGAGAGAAAAAGAAGACAAGAAAGTTTGAGAAGACAATCAGGTATGCCTCAAGGAAGGCCTATGCAGAGACTAGGCCTCGTATAAAGGGTCGATTCGCCAAGAGAACAGATGTAGAAGCTGAAGTGGATCAGATGTTCTCCACAACACTAATTACAGAAGTTGGATATGGCATTATCATTTGGACTGGGAAAAGAAGAGCTTGA 1080 0.5398 MLEAEATATWARTCDTCRSAPSTLFCRAHSAYLCAACDARLHPAAAASWHERVWVCEACERAPAAFLCKADAASLCSSCDADIHSANPLAGRHHRIPVLPISGAGPHADVADDDDDAADVDDEDETASWLLLNPLKSGGVPNNNNNNGFLYSGEVDEYLDLVDNCNSCGDNNHFTATATTTDHYTQHQHFGDVSHQKSYAGDSVVPVQHHHHFQLGLDFDNSKPAFSYNGSVSQSVSVSSMDVGIVPESTMRDVSIGLSRPPKGTIDLFSGPPIQMPSHLTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTTLITEVGYGIIIWTGKRRA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9842g00003 359 ProSiteProfiles Zinc finger B-box type profile. 9 55 IPR000315 GO:0008270
Mupr9842g00003 359 SMART bboxneu5 9 47 IPR000315 GO:0008270
Mupr9842g00003 359 SMART bboxneu5 51 98 IPR000315 GO:0008270
Mupr9842g00003 359 CDD Bbox1_BBX-like 14 55 - -
Mupr9842g00003 359 CDD Bbox1_BBX-like 55 98 - -
Mupr9842g00003 359 ProSiteProfiles Zinc finger B-box type profile. 51 98 IPR000315 GO:0008270
Mupr9842g00003 359 ProSiteProfiles CCT domain profile. 285 327 IPR010402 GO:0005515
Mupr9842g00003 359 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 14 341 IPR045281 GO:0009909
Mupr9842g00003 359 Pfam B-box zinc finger 53 97 IPR000315 GO:0008270
Mupr9842g00003 359 Pfam CCT motif 285 327 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9842g00003 Mupr-Chr9842 23786 27090 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9842g00003 3 351 C2C2-CO-like Transcription Factor Family AT3G02380 54.545 1.03e-123 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mupr9842g00003 zf-B_box 4.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9842g00003 K12135 - gmx:100301886 553.903