Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9840g00001 ATGGTGTCTAATTTTCTCATTGCAAGATTAACTGCAACATCATCATTCACACGCTACAACACTACCCATATTCAATTGGCTTCTCTGCTGCAACACAAACACACTGCTTCACTTTTTTTCTTCAATTCTTTCACTTCACCCACCTCTTCTGATTCCGAATCAGATGGAAACCACCTCAAAGGTGATACCTTTACCGTGTCTTACCTCATCAACTCATGTGGGGTGTCCCCAAACCTGGCCAGGAAACTCTCCAACAGGGTCAATTTGAAAACCCCAGATGGCCCAAATGCTGTTATTGATCTTCTCAACAACTATGGGTTCTCAAAAACCCATCTTGCAAAACTTGTGGAGAGACATCCCTCAGTGCTTGTTGCAAAGGCAGAGAATACCCTTTTGCCCAAACTCAAGTTCTTTCATTCTATTGGGATTTCCAACGGTGACATGCCCAAGATCCTAATTGCTAACCACACCATCTTGTTAAGAAGCTTGGAAAAGTTCCTCGTCCCACGTTATGAGATTCTCAGGTGTGTAGTTCGTGATGATGGCGAAGTTGTTAGAGCTTTAAAAAATACCCCATTTGGTTTTACGTGTGGTGACATAATGAATGACTTGGTTCCAAACATTGAGGTTTTGAGGCAATCTGGTGTGCCCCAAGCTTCCATCTCTTACCTGATGATCCATTCTGGGACCGTAGCCTACTGGAAGCATTCCAAGTTTGTGGAAGCTGTTAAAACTGCTAAGGAAATTGGGTTTAATCCTTTGAGAACAAATTTTATTGTGGCTGTTGAAATGCTTGTGACTATGAGCAAAGCAGTGTGGGAATCAAGGTTTGAGATTTATGAGAGGTGGGGTTGGGACCGCGAAATGGCTCTTCGAGCATTTAGAAAGTTCCCCAGTTTTATGAAGTTGACAGAGAAATCGTTTACCAAAAAAATGAGTTTCCTGGTGAAGGATATGGGTTGGCCTTCAGAAGATATTGCTGATTATCCTCAAGTTGTAGCATACCACTTGGAGAAGAGGATTGTCCCTAGATTCTCGGTAATCAAAATCTTGAAATCAAAAGGTTTGATTGGCAATAATGTGCACTTTAGTTCCATTATTTGCATAACTGAGGAAAACTTTTTGGAGAAGTTTGTTGTCAATTTTCAGAAAGATTTGCCTCTCTTGCCAGATGTCTACAACAGTTTGATCAATGAACAGAATCTGATGAGCATGGCGCTGAGTATGAGTTGCAGGCAGCCTTGGATTGAGCATGTGGGAGAGAAGAAGTTAAAGCACAATGGAGGTTCTTGCTACTTTAGAGATGCTTCCATGACAATAGAAGTGGATCCTAGTAAATTAACTGCATCACTCACACACCACAGAAGTACCCAAATCCAATTGGGTTTTCTTCTGCAACCCAAATCCAATGGTACCCACAGAAGTACCCTTATTTTCTTCAATTCGTTCACTTCAGGCACCTCTTCTTATTCTGAATCAGATGGAAACCATCACAAAGGTGACACCTTTACCGTGTCTTACCTCGTCAACTCATGTGGGGTGTCCCCAGAATTGGCTAAGAAACTCTCCAACAGGGTCAATTTGAAAACCCCAGATGGCCCAAACGCTGTTCTTGATCTTCTCAACAACTATGGGTTCTCAAAAACCCACCTTGCAAAACTCGTGGAGAAACATCCCACAGTGCTTTTTGCAAATGCAGAGAATACCCTTTTCCCTAAACTCAAGTTCCTCCGTTCTATTGGGATTTCCAACACTGACATGCCTAAAATCCTAATTGCCAGTCACCATATCTTGTTCAGAAGCTTGGAAAAATGCCTAATCCCACGTTATGAGATCCTAAGGAGTGTACTTCGTGACGATCTCGAAGTTGTTAGAGCATTGAAAAATGCCCCGTTTGGTTTTACATATGGTGACATGGTGAATCACTTGGTTCCAAACATTGAGGTTTTGAGGCAGTGTGGTGTGCCACAAGCTTCCATCTCTTACCTGATGATCCATTCTGGGACTCTAGCCTTCAGGAAGCATTCCAAATTTGTGGAAGCTGTCAACACTGCTAAGGAAATTGGGTTTAATCCTTTGAGAACAAATTTTATTGTGGCTGTTGAAATGCTTGTAACTAAGAGCAAAGCAGTGTGGGAATCAAGGTTTGAGATTTATGAGAGGTGGGGCTGGAACCGCAAAATGGCTCTCCGAGCATTTCGGAAGTTTCCCAGTGTTGTGAAGTTGTCAGAGGAGACGTTTACCAAAAAAATGAGTTTCCTGGTGAAGGATATGGGTTGGCCATCAAAAGATATTGCTGAATATCCTCTGGTTGTAGGGTACAACTTGGAGAAGAGGATTATCCCTAGATTCTTGGTAATCAAAATGTTGAAATCAAAAGGTTTGCTTGAGAATAATGTGCACTTTAGTTCCATTATTTGTGTAACTGAGGAAAATTTTTTGGAGAAATTTGTTGTCAATTTTCAGAAAGATTTGCCTCTCTTGCCAGATGTCTATAGAGTTTTTGAAGAACTCAATTCACTGCTCTTGAGTTTGATTGGAAATTTGGGAGCAGATCCTGACATGGAGGTCAGAGCATTTGAGATCATTCGCATTGTGTTGGGTCTGCTTTCG 2613 0.4171 MVSNFLIARLTATSSFTRYNTTHIQLASLLQHKHTASLFFFNSFTSPTSSDSESDGNHLKGDTFTVSYLINSCGVSPNLARKLSNRVNLKTPDGPNAVIDLLNNYGFSKTHLAKLVERHPSVLVAKAENTLLPKLKFFHSIGISNGDMPKILIANHTILLRSLEKFLVPRYEILRCVVRDDGEVVRALKNTPFGFTCGDIMNDLVPNIEVLRQSGVPQASISYLMIHSGTVAYWKHSKFVEAVKTAKEIGFNPLRTNFIVAVEMLVTMSKAVWESRFEIYERWGWDREMALRAFRKFPSFMKLTEKSFTKKMSFLVKDMGWPSEDIADYPQVVAYHLEKRIVPRFSVIKILKSKGLIGNNVHFSSIICITEENFLEKFVVNFQKDLPLLPDVYNSLINEQNLMSMALSMSCRQPWIEHVGEKKLKHNGGSCYFRDASMTIEVDPSKLTASLTHHRSTQIQLGFLLQPKSNGTHRSTLIFFNSFTSGTSSYSESDGNHHKGDTFTVSYLVNSCGVSPELAKKLSNRVNLKTPDGPNAVLDLLNNYGFSKTHLAKLVEKHPTVLFANAENTLFPKLKFLRSIGISNTDMPKILIASHHILFRSLEKCLIPRYEILRSVLRDDLEVVRALKNAPFGFTYGDMVNHLVPNIEVLRQCGVPQASISYLMIHSGTLAFRKHSKFVEAVNTAKEIGFNPLRTNFIVAVEMLVTKSKAVWESRFEIYERWGWNRKMALRAFRKFPSVVKLSEETFTKKMSFLVKDMGWPSKDIAEYPLVVGYNLEKRIIPRFLVIKMLKSKGLLENNVHFSSIICVTEENFLEKFVVNFQKDLPLLPDVYRVFEELNSLLLSLIGNLGADPDMEVRAFEIIRIVLGLLS 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9840g00001 871 Gene3D Transcription termination factor 3, mitochondrial 179 386 IPR038538 -
Mupr9840g00001 871 Gene3D Transcription termination factor 3, mitochondrial 619 825 IPR038538 -
Mupr9840g00001 871 PANTHER CGI-12 PROTEIN-RELATED 501 819 IPR003690 GO:0003690|GO:0006355
Mupr9840g00001 871 FunFam Mitochondrial transcription termination factor-like 602 825 - -
Mupr9840g00001 871 Pfam mTERF 265 375 IPR003690 GO:0003690|GO:0006355
Mupr9840g00001 871 Pfam mTERF 705 813 IPR003690 GO:0003690|GO:0006355
Mupr9840g00001 871 Pfam mTERF 538 691 IPR003690 GO:0003690|GO:0006355
Mupr9840g00001 871 Pfam mTERF 99 306 IPR003690 GO:0003690|GO:0006355
Mupr9840g00001 871 SMART mt_12 291 322 IPR003690 GO:0003690|GO:0006355
Mupr9840g00001 871 SMART mt_12 588 619 IPR003690 GO:0003690|GO:0006355
Mupr9840g00001 871 SMART mt_12 185 217 IPR003690 GO:0003690|GO:0006355
Mupr9840g00001 871 SMART mt_12 113 144 IPR003690 GO:0003690|GO:0006355
Mupr9840g00001 871 SMART mt_12 552 583 IPR003690 GO:0003690|GO:0006355
Mupr9840g00001 871 SMART mt_12 762 796 IPR003690 GO:0003690|GO:0006355
Mupr9840g00001 871 SMART mt_12 149 181 IPR003690 GO:0003690|GO:0006355
Mupr9840g00001 871 SMART mt_12 730 761 IPR003690 GO:0003690|GO:0006355
Mupr9840g00001 871 SMART mt_12 624 656 IPR003690 GO:0003690|GO:0006355
Mupr9840g00001 871 SMART mt_12 323 357 IPR003690 GO:0003690|GO:0006355
Mupr9840g00001 871 FunFam Mitochondrial transcription termination factor-like 163 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9840g00001 Mupr-Chr9840 352 11364 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mupr9840g00001 mTERF 2.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9840g00001 K15031 - gmx:106799612 657.136