Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9817g00004 ATGGGAAGAGCTCCTTGCTGTGACAAGGCAAATGTGAAGAGAGGACCATGGTCACCAGAAGAAGACTCAAAGCTCAAGGAGTACATCGAGAAGCATGGCACCGGAGGGAATTGGATTGCTCTTCCTCAGAAAGCTGGTCTAAAGAGATGTGGAAAAAGTTGCAGATTGAGATGGCTTAACTATCTTAGGCCTAACATTAAGCACGGGGAGTTCACCGACGAGGAAGACAGAATAATTTGCAGCCTTTATGCTAATATTGGAAGCAGGTGGTCAATCATAGCTGCACAATTACCAGGAAGGACTGACAATGATATCAAGAACTATTGGAACACCAAGCTTAAGAGGAAACTGATGGGGTTGCTTCCTGCATCTCATCAAAGAATAGCACCCTATCAATCCTGCCCTCAAAACCCACCACCATCATTTCCTTCTCACTCATTATCCTCCTCAATCTACAGAGACTACTGCAACAATTCTCATTATTACACCATCCCAGCACCAACCGTGTCTTTCACATGCCTTGAACCAATTTCTGTCCCTTCAAGTAATTACACAAGCACAACAACCTCCACCTCTCTCCCTTTTTACCAAAACCAAGAGCCCTTGGTCAGTGTTAGTCCCATGCAGTATCATTACCCCATCACAGACAGTCCCATGCTTGTGTTTGGAAGTGAAGCAAGTTGCAGTTCCTCTGATGGGAGCTGCAGTCAGGTTAGCCTTGGCAGAGAGATCAAACAAGAAGAAATGGGGTTTCAGAATTTCATGTTTGGAGATCACAGCAAGTTTTTGCTTAATCATGATGGAGGCGAAGAATATGTGAACGGGTCCTTTTTTCAAACCCAAACAGCACTGGATTACGATCTTGAGGTTATTAAGCAACTCATTAACAGTAACAGTAGAAATAACAGTAGTAATAATAATAATAATGGGTACTTGAGTGTTGATGAAAACAAGACGGAGGAGAAGGGCGTGTACTACAACTACTGA 987 0.4336 MGRAPCCDKANVKRGPWSPEEDSKLKEYIEKHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGEFTDEEDRIICSLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKRKLMGLLPASHQRIAPYQSCPQNPPPSFPSHSLSSSIYRDYCNNSHYYTIPAPTVSFTCLEPISVPSSNYTSTTTSTSLPFYQNQEPLVSVSPMQYHYPITDSPMLVFGSEASCSSSDGSCSQVSLGREIKQEEMGFQNFMFGDHSKFLLNHDGGEEYVNGSFFQTQTALDYDLEVIKQLINSNSRNNSSNNNNNGYLSVDENKTEEKGVYYNY 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9817g00004 328 SMART sant 13 64 IPR001005 -
Mupr9817g00004 328 SMART sant 67 115 IPR001005 -
Mupr9817g00004 328 Gene3D - 7 68 - -
Mupr9817g00004 328 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mupr9817g00004 328 FunFam Transcription factor RAX3 7 68 - -
Mupr9817g00004 328 CDD SANT 16 62 IPR001005 -
Mupr9817g00004 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mupr9817g00004 328 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mupr9817g00004 328 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mupr9817g00004 328 CDD SANT 70 113 IPR001005 -
Mupr9817g00004 328 PANTHER OS09G0431300 PROTEIN 1 301 - -
Mupr9817g00004 328 FunFam Transcription factor MYB36 70 138 - -
Mupr9817g00004 328 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mupr9817g00004 328 Gene3D - 69 132 - -
Mupr9817g00004 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mupr9817g00004 328 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9817g00004 Mupr-Chr9817 49163 50732 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9817g00004 1 119 MYB Transcription Factor Family AT5G57620 88.235 2.91e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr9817g00004 Myb_DNA-binding 7.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9817g00004 K09422 - gmx:100796382 531.176