Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9817g00003 ATGCAGAGATCCGGGTATGGGTCGGATGGAATATACAGGTCTCTGAGACCTTCCCAATCCTTTGTCTTACCACAAAATCCCAACCTCTCCCTCGTTTCTCACCTCTTCGACACTGTTGCTCCGTTTCCCTCTAAAACCGCCCTCATCGATGCCGACTCTTTCGAAACCCTTTCCTACGCCGACCTTAAGTCATTAACCATTAAAGTCTCACACGCCCTCCTCCGCCTCGGCGTCGTCAAAAACGACGTCGTCCTTTTCCTCGCCCCCAACGACATCCGCTACCTTATCTGCTTCCTCGCCGTCGCCGCCATCGGCGCTGCCTCCACCACCGTCAATCCCGCCTACACCGCCGCTGAGGTCTCCAAACAGGTCAAGGACTCCAATCCCAAACTCGTCGTCACCGTCGCCGAGCAATGGGACAAGCTTCAGCACCTCAACCTCCCTGCTGTGTTCCTCCGCTCCTCCTCCGCGACCGCCACGAGCTTCGATGCGCTGGTGGAACTCGCCGGGTCGCCGACCGAGTTTCCGCCGAGTGACGTTAAACAGAGCGACACGGCGGCGCTGCTGTACTCGTCGGGGACCACGGGCGTGAGCAAGGGCGTGATACTGACGCACGGGAACTTCATCGCGGCTTCGGTGATGCTTGCAATGGACGACGATTTGGCCGGAGAGATGAACAGCGTGTTCCTGTGCGTTTTGCCGATGTTTCACGTGTTCGGTTTGATGGTGATTTCGTACGCTCAGCTTCGGAGGGGCAGTGCGGTGGTGTCTCTGAAGAAGTTCGAGTTCGAACTGGTTCTGAAGACGGTTGACAAGTTTAGGGTCACGCATTTGTGGGTTGTGCCTCCGATTATTCTTGCTTTGACCAAACACGGTTTGGTCGATAAGTACGATCTTTCCTCCTTGAAGTATATTGGTTCTGGCGCTGCTCCTCTCGGGAAAGAGTTGATGGAGGAGTGTGCCAAACGTTTCCCTCATGCCACTGTTTCTCAGGGATATGGTTTGACTGAAACTTGTGGGATTGTTTCTGTGGAGAATCCTAGGATGGGGGTTCGGCATTCTGGCTCTGCCGGAATGCTTGTTGCAGGAGTGGAAGCTCAAATAGTTTGCGTGGATACGCTGAAGCCTCTCCCTCCTGGACAGTTGGGGGAGATATGGGTTCGTGGTCCTAATATGATGCGAGGTTATCACAACAATCCCCAAGCCACAAAATTGACTATAGATAAAAAGGGGTGGGTACATACAGGAGATCTTGGATATTTTGATGGCGATGGGCAACTTTTTGTTGTTGATCGTATCAAAGAACTGATCAAATATAAAGGTTTTCAGGTTGCACCAGCAGAACTTGAAGGGCTTCTTGTTTCTCACCCTGAAATACTTGATGCTGTTGTCATCCCATATCCCGATGCCGAAGCTGGTGAGGTTCCAGTTGCCTATGTTGTTCTTTCACCCAATAGTTCACTGACTGAGGAAGATGTTAAGAAGTTTATTGCTAATCAGGTAGCGCCTTTCAAAAGATTACGAAGGGTGTCATTCATCAATGCTGTTCCCAAGACAGCATCGGGAAAAATTCTCCGAAGAGAGCTTATCCAGAAAGTAAGATCCAAAATATGA 1614 0.513 MQRSGYGSDGIYRSLRPSQSFVLPQNPNLSLVSHLFDTVAPFPSKTALIDADSFETLSYADLKSLTIKVSHALLRLGVVKNDVVLFLAPNDIRYLICFLAVAAIGAASTTVNPAYTAAEVSKQVKDSNPKLVVTVAEQWDKLQHLNLPAVFLRSSSATATSFDALVELAGSPTEFPPSDVKQSDTAALLYSSGTTGVSKGVILTHGNFIAASVMLAMDDDLAGEMNSVFLCVLPMFHVFGLMVISYAQLRRGSAVVSLKKFEFELVLKTVDKFRVTHLWVVPPIILALTKHGLVDKYDLSSLKYIGSGAAPLGKELMEECAKRFPHATVSQGYGLTETCGIVSVENPRMGVRHSGSAGMLVAGVEAQIVCVDTLKPLPPGQLGEIWVRGPNMMRGYHNNPQATKLTIDKKGWVHTGDLGYFDGDGQLFVVDRIKELIKYKGFQVAPAELEGLLVSHPEILDAVVIPYPDAEAGEVPVAYVVLSPNSSLTEEDVKKFIANQVAPFKRLRRVSFINAVPKTASGKILRRELIQKVRSKI 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9817g00003 537 Gene3D - 12 434 IPR042099 -
Mupr9817g00003 537 FunFam 4-coumarate--CoA ligase 2 435 536 - -
Mupr9817g00003 537 Pfam AMP-binding enzyme 37 439 IPR000873 -
Mupr9817g00003 537 FunFam Long-chain-fatty-acid--CoA ligase FadD 18 434 - -
Mupr9817g00003 537 Pfam AMP-binding enzyme C-terminal domain 448 523 IPR025110 -
Mupr9817g00003 537 SUPERFAMILY Acetyl-CoA synthetase-like 25 535 - -
Mupr9817g00003 537 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 532 - -
Mupr9817g00003 537 CDD 4CL 23 529 - -
Mupr9817g00003 537 ProSitePatterns Putative AMP-binding domain signature. 188 199 IPR020845 -
Mupr9817g00003 537 Gene3D - 435 536 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9817g00003 Mupr-Chr9817 35083 39048 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9817g00003 1 537 Monolignol Biosynthesis Gene Families AT4G05160 66.484 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9817g00003 K01904 - gmx:100797843 910.983