Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9814g00003 ATGGCACATGACGACTGTTGTTCTATATGTAAGGAGGAGTTGGATGTAAATGCGGAATACCTTTCGATGCCATGTATTGTGACATGGTTACAAATTAATAATAGTGAGGATTGTCCAATATGTTTAGAAGAGTTTGATGTTAATATTGAGTTTTATATAATGTCATGTAATCATGGATTTCATCAACAATGTATTGTAACTTGA 204 0.3235 MAHDDCCSICKEELDVNAEYLSMPCIVTWLQINNSEDCPICLEEFDVNIEFYIMSCNHGFHQQCIVT 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9814g00003 67 Pfam RING-like zinc finger 37 65 IPR001841 -
Mupr9814g00003 67 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 30 67 IPR013083 -
Mupr9814g00003 67 ProSiteProfiles Zinc finger RING-type profile. 38 65 IPR001841 -
Mupr9814g00003 67 CDD RING-H2 38 65 - -
Mupr9814g00003 67 SUPERFAMILY RING/U-box 3 45 - -
Mupr9814g00003 67 SUPERFAMILY RING/U-box 31 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9814g00003 29 66 C3H Transcription Factor Family AT5G41350 44.737 5.49e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9814g00003 - K22378 mcaf:127738453 48.9062