Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9805g00003 ATGATGGTCGAAGACCGTTTTCCGGTGGGTATGCGTGTACTTGCCGTTGACGATGACCAAACGTGTCTCAAAGTGTTGGAGAACTTGCTTCGCAAATGCCAGTATAATGTTACTACAACTACTCAGTCAATTAAGGCGCTAGAAATGTTGAGGAAAAACAGAAATAGGTTTGACCTTGTTATTAGTGATGTAAATATGCCAGACATGGATGGGTTTAAGCTGCTTGAGCTGGTGGGACTTGAAATGGACGTACCTGTTATAAGATACTGTGATAGAGAGCGTGTGATGAGAGGTGTTATACATGGCGCTTGTGACTATTTAATGAAACCGGTTCGAATTGAAGAGTTACAGAACATATGGCAACATGTAGTGCGAAGGAAGATTGATAGCAAGGATAAGAATAAGATTGCAGGTGAGGAAAAGGCCTGCAGTATGGCTGGTAAGTTTGCAAATGAGGAGAAATCCTGCAATATGCCTGGGGAAGGTAGTCAAGTCATGGCATCAAAATATAATGCTGAGCAGAATAACAAACTGGGTCAAAAAAGGAAGGAACAAAGGGAGGTTGAGGAAGAGGAAGAAGATGACCAAGAGAATGATGAACTCTCAAATCAGAAAAAGGCTCGTTTAGTCTGGGATGTCGAGTTACATAGCAAATTTCTTGCTGCCATTAATCAACTTGGCATTGACAAGGCTTTCCCCAAGAGAATACTTGACTTGATGAACGTTGAAGGGCTTACAAGGGAAAACGTAGCAAGCCATCTGCAGAAATACAGACTCGGTCTCAAAAAACCTACTCAACAGGTTGCTACACTGGGTAGTAGTGATCCTTACCTGCAGATGGGTTCAGTAGAAGGCTTTGGCAATCCTTCTGGATCAGGAGGAATGTTAAGCATCACACTACCATCGTATGCATCTGGTGGAATGTTTTGTAGACTGAACTCCCCATATAGCTTAAACATTAGAGGAATTAACTCTCCTACACTTGTTGGCCCTGTTCAGTCTCAAAACATTAGCAGCAGCTCCATAAAAGCACTTGGAAAGATGCAGCTGTCCATGTTTTCTGCAAATCAAACCTCAAGTTTACTACAGGGCATTCCAACATCAACTGAGGCTAACCAATTTCGGCAGAACAACGGTTCAACTGGCATTAGGAAGTTGAGTCCACTTGATTATTCAAGTGGACTTAAAGTTTCATCTGGTTTCTCAGACAGCAGAGGTACTGTTAGTTATCCAAATAAATCTCTACCTGGCCTCTCGGGTAATCATTCACCATTACAAGGAAATTCCCCTCCCACACATAATGCAGGAGCATTCAGAAATCACTCTTCTCTTGGCACTGCTTCCGTGAACACACAATCTTTTGACCCTGGCATCCGTGCTTCCTCTGCTATGTTGGATTATAATCGGTGTAATAAAAGTTGGCAGGGAGCACCTCATATATCTAACTTTCCTGCTAGTAATGATCAATTGTCTCAAAATAACTTAAACTTTTCGTCATTCACCTTTTGTGGTGGGAACAGTGCAGTTGATTTTTCTTCCGCCAGTGCTATTGCTGTTCCTTTGGAGGATGCTAGAGGTGAACTACAATGCCAAGAAGGCTTACTTGGGAATATCTTACTGGCTTCGCATTATCAAAGCTGGGAAGCAGACAAGGGAGGTTGCAACAAAGACACGAGACAAACCTTCAATTCCATAAATTCTGTGGTTTCTCTTAATGGAGACACTAGTTCCTTGGGGCATAGTTTAGACCAAAATAATACAATTTACAGCAAGAGAATTGATGCATCTTTGGTTAGCCAAATGAATGGGGTTAACCCATCAATCACACAGTCCAGTGAAGATGAGAAATTCTATTCAATGAAGTCAAATGATGCTTGCATTTTGCAGAGCATGAAGTCCCAAGAAGGACTAATGCAGAATAGTTTTGGGTCCTTGGATGACATAATGAGTGAAATAGTCAAACAGGAGCAAAATGCGATTATGTTGATGGATGGAGAAATGGAGTTTGATGCTTACCATGTTGGATCCTGCATTTGA 2037 0.4178 MMVEDRFPVGMRVLAVDDDQTCLKVLENLLRKCQYNVTTTTQSIKALEMLRKNRNRFDLVISDVNMPDMDGFKLLELVGLEMDVPVIRYCDRERVMRGVIHGACDYLMKPVRIEELQNIWQHVVRRKIDSKDKNKIAGEEKACSMAGKFANEEKSCNMPGEGSQVMASKYNAEQNNKLGQKRKEQREVEEEEEDDQENDELSNQKKARLVWDVELHSKFLAAINQLGIDKAFPKRILDLMNVEGLTRENVASHLQKYRLGLKKPTQQVATLGSSDPYLQMGSVEGFGNPSGSGGMLSITLPSYASGGMFCRLNSPYSLNIRGINSPTLVGPVQSQNISSSSIKALGKMQLSMFSANQTSSLLQGIPTSTEANQFRQNNGSTGIRKLSPLDYSSGLKVSSGFSDSRGTVSYPNKSLPGLSGNHSPLQGNSPPTHNAGAFRNHSSLGTASVNTQSFDPGIRASSAMLDYNRCNKSWQGAPHISNFPASNDQLSQNNLNFSSFTFCGGNSAVDFSSASAIAVPLEDARGELQCQEGLLGNILLASHYQSWEADKGGCNKDTRQTFNSINSVVSLNGDTSSLGHSLDQNNTIYSKRIDASLVSQMNGVNPSITQSSEDEKFYSMKSNDACILQSMKSQEGLMQNSFGSLDDIMSEIVKQEQNAIMLMDGEMEFDAYHVGSCI 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9805g00003 678 NCBIfam myb-like DNA-binding domain, SHAQKYF class 206 259 IPR006447 GO:0003677
Mupr9805g00003 678 Coils Coil 171 194 - -
Mupr9805g00003 678 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 357 IPR045279 GO:0009736
Mupr9805g00003 678 ProSiteProfiles Response regulatory domain profile. 12 124 IPR001789 GO:0000160
Mupr9805g00003 678 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 262 IPR017930 -
Mupr9805g00003 678 Pfam Response regulator receiver domain 13 118 IPR001789 GO:0000160
Mupr9805g00003 678 PIRSF RR_ARR_type-B 1 678 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mupr9805g00003 678 SUPERFAMILY CheY-like 10 131 IPR011006 -
Mupr9805g00003 678 CDD REC_typeB_ARR-like 13 124 - -
Mupr9805g00003 678 MobiDBLite consensus disorder prediction 172 203 - -
Mupr9805g00003 678 FunFam Two-component response regulator 202 264 - -
Mupr9805g00003 678 Gene3D - 202 263 - -
Mupr9805g00003 678 MobiDBLite consensus disorder prediction 398 442 - -
Mupr9805g00003 678 Pfam Myb-like DNA-binding domain 210 258 IPR001005 -
Mupr9805g00003 678 Gene3D - 10 143 - -
Mupr9805g00003 678 SMART REC_2 11 120 IPR001789 GO:0000160
Mupr9805g00003 678 SUPERFAMILY Homeodomain-like 204 263 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9805g00003 Mupr-Chr9805 5317 8761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9805g00003 5 378 Response Regulator Gene Family AT2G25180 49.357 1.99e-107 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mupr9805g00003 Response_reg 1.7e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9805g00003 K14491 - gmx:100803040 996.497