Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9802g00003 ATGCTAACAACAGAATCTTTGCAGAAGCTTCCAAAAAATTTCAGTAGACAATACGGAGATGGAATGTCAAATCCGGTGTTTCTCAAGCTTCCAGATGGTGCTGAATGGAAAATATATTGGACCAAGCATGATGGTGAGATTTGGTTTCAAAGGGGTTGGAAAGATTTTGCCACACATTATTCTCTAGATCATGGGCACTTGCTGTTCTTTGAATATGAGGGAACTTCTCATTTTGTTGTGCACATATTTGACAATAGTAGTGTTGAAGTAGACTATCCTTCCCATGGTACTCATGATGGAAAGGACAACCTAGTGCAGATCAGTGATGATTCTGTTGAAGTTTTGGATGAGCAATTTTCATGCCCAAAGACTAGAATGAAATGCAGAGTGTCATCTCTTCAACCTTGTAAGAAAATGAAAAATAGTGTAACTACAAGTGTCGAAAGAAGCCCCAATGGGGTAAACTTGCATCAGCATGACCAAACTAGAAGGACTACCTCTCAAGAGGCAAAATTTATGAAGCAAAAATTAGATGAAGATAAGGGTAAAGACATTTTTCACGCTAAATCCCCAAAAGTGGAGCAATTAACTTCTACCACTTTAAGCAAAGCCACAACTTTCAGATCTGAACATCCCTCTTTCATGCTTGTCATGAAGCCATCCTTTATTAATGGAGATTACCTGGAAATACCACCGCAGTTTTCAGAACAATATTTGAAGAAAAAACATGCAGTATTCCTCCTTGAGGTCTTGGATGGGAGAAGTTGGCCTGTTACTCTTTCTGCTGCTAGAATTACTGGAGGATGGCTGAAATTTGCATCAGAAAATAATTTGAATGTGGGGGATATTTGTGTTTTTAAGTTGATCCAGAAGATCCAATGTCCTGCTTTCCAAGTTTCCATTTTTCAAGGTGTAGAGAAACCAAGTAGTCCCATTTCACAAGCTAAAACTGAATTAAGTGAAAATGCAAATACAGATATTTCAAAATGCAGCATAGTGAATCCTTCAACTAACAGGAGAGATGGGAAATCAAGTGAAATATCTTCAGGGTTGGAAAGCTACTTCAAGGCAAAGAGAGCTCATAAAGAAGCTAGCAAATTCACGTCAGAAAATCCCTTCTTCATGGCGACTTTAAAATTGCAGTCAAAAACAACCAGATGTCCGTTGTGGAATTTTTTATTGTTGTTTCATGAATTGTTTGATTTTGTTCTAACGGTGATGGACATATTTATGTATGAGTTGATGCAGCGTGTGCCGTGTAAGTTTGTGAGAAAGTATTTTATGAACATGAACCGGAATGTGATGATAATACAGTTTAGAAAGAGATCGTGGCCTGTAACGTTTGTACTTAATGAATCCGATACTTCAGGCACACTCTCTGCTGGTTGGCCCTTATTTTCAACACAAAATAAACTGCAAGAAGGAGATGTTTGTATCTTTGAGCTCGTCAATAGAGAAGATACAACACTTGATCTTCAT 1479 0.3793 MLTTESLQKLPKNFSRQYGDGMSNPVFLKLPDGAEWKIYWTKHDGEIWFQRGWKDFATHYSLDHGHLLFFEYEGTSHFVVHIFDNSSVEVDYPSHGTHDGKDNLVQISDDSVEVLDEQFSCPKTRMKCRVSSLQPCKKMKNSVTTSVERSPNGVNLHQHDQTRRTTSQEAKFMKQKLDEDKGKDIFHAKSPKVEQLTSTTLSKATTFRSEHPSFMLVMKPSFINGDYLEIPPQFSEQYLKKKHAVFLLEVLDGRSWPVTLSAARITGGWLKFASENNLNVGDICVFKLIQKIQCPAFQVSIFQGVEKPSSPISQAKTELSENANTDISKCSIVNPSTNRRDGKSSEISSGLESYFKAKRAHKEASKFTSENPFFMATLKLQSKTTRCPLWNFLLLFHELFDFVLTVMDIFMYELMQRVPCKFVRKYFMNMNRNVMIIQFRKRSWPVTFVLNESDTSGTLSAGWPLFSTQNKLQEGDVCIFELVNREDTTLDLH 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9802g00003 493 Pfam B3 DNA binding domain 217 303 IPR003340 GO:0003677
Mupr9802g00003 493 Pfam B3 DNA binding domain 9 85 IPR003340 GO:0003677
Mupr9802g00003 493 Pfam B3 DNA binding domain 417 490 IPR003340 GO:0003677
Mupr9802g00003 493 PANTHER B3 DOMAIN-CONTAINING 207 485 - -
Mupr9802g00003 493 MobiDBLite consensus disorder prediction 141 164 - -
Mupr9802g00003 493 SUPERFAMILY DNA-binding pseudobarrel domain 8 86 IPR015300 -
Mupr9802g00003 493 ProSiteProfiles B3 DNA-binding domain profile. 213 305 IPR003340 GO:0003677
Mupr9802g00003 493 SMART B3_2 1 86 IPR003340 GO:0003677
Mupr9802g00003 493 SMART B3_2 214 305 IPR003340 GO:0003677
Mupr9802g00003 493 SMART B3_2 402 489 IPR003340 GO:0003677
Mupr9802g00003 493 Gene3D - 2 87 IPR015300 -
Mupr9802g00003 493 SUPERFAMILY DNA-binding pseudobarrel domain 208 302 IPR015300 -
Mupr9802g00003 493 SUPERFAMILY DNA-binding pseudobarrel domain 401 485 IPR015300 -
Mupr9802g00003 493 CDD B3_DNA 417 493 IPR003340 GO:0003677
Mupr9802g00003 493 CDD B3_DNA 10 84 IPR003340 GO:0003677
Mupr9802g00003 493 MobiDBLite consensus disorder prediction 141 161 - -
Mupr9802g00003 493 Gene3D - 193 306 IPR015300 -
Mupr9802g00003 493 Gene3D - 355 493 IPR015300 -
Mupr9802g00003 493 ProSiteProfiles B3 DNA-binding domain profile. 401 493 IPR003340 GO:0003677
Mupr9802g00003 493 ProSiteProfiles B3 DNA-binding domain profile. 1 86 IPR003340 GO:0003677
Mupr9802g00003 493 CDD B3_DNA 212 302 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9802g00003 Mupr-Chr9802 28685 30774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9802g00003 358 492 B3 DNA Binding Superfamily AT3G18990 26.667 3.56e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr9802g00003 B3 2.1e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9802g00003 - - ccaj:109791753 578.941