Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9802g00002 TCAGAGAAATCTCCTTTTGAGTTTTCACCTTCAGGTCTCATCTCAACGTCCTATGATATGACTTCCTCACACAATAAGCAACACTTGCATGCTGTAGTCCGTTTCTTCAAGATTATCCTCGGAACAAGTCTTGCAGATGGAGAAATTAGGCTGCCAAAATATTTCACTAGAAAATATGAAAATGGGATGTCAAATCCGGTGTTTCTCAAGCCTCCAGATGGCACTGAATGGAAAATATATTGGACCAAGCATGATGGTGAGACTTGGTTTCAAAAGGGTTGGAAGGAATTTGCCACCTACTATTCTCTAGATCATGGCCACTTGCTATTCTTTGAATATGAGGGAACTTCTTATTTTGATGTGCACATATTTGGCAAAAGTGCCGTTGAAATAAACTATCCTTCCCATGGAAATCATGATGGAAATAGCAGCATTATGCAGATCATTGATGATTCTGTTGAAATTGTGGATGAGAAATTTTCATGCCAAAAGACTAGAGTGAAATCCAGAGTGTTATCGCTTCAACCTTGTGAGAAAATGAAAAATAACACAACTACAAATGATGAAAGATGCCCCAATGGAGTAAACTTGCATCAGGATGTCCAAACTAGAAGTACTAGCTCTCAAGAGGAAAAAATTATTATGAAGCGAAAATTAGATGAAGACGAGGGTAAAAGCATTTTTCACACTGAATGCCCAAAAGTGGAGAAGTTAACTTCCACAGTTTTACAAAAAGCCACAACTTTCAGATCTGACCATCCCTATTTCATGCTTGTCATGAAGCCATCCTTTATTAATGGAGATTACCTGAAAATACCGCCACAATTTTCAGAACAATATTTGAAGATAACACGTGCTGTTGTCCTCCTTGAGGTCTTGGATGGGAGAAGTTGGCCTGTAATTTATTCTGCTTCTAGAATTTGTGGGGGATGGCAGAAATTTGCATCAGAAAATAATTTGAATGTGGGAAATGTTTGTTTTTTTGAGCTGATCCAAAAGATCCAGGGCCTTGCTTTCAAAGTTTCGATCTTTCAAGGGGCTGACAAACCAAGTTGCCCCGTTTCACAGGGTGGGACTTCTAGTCAAAGATCTTCAGGGCTGAAGAGCCACTTCAAGTCAAAGGACTTAACAACAATAGCTCTTGAAGAAGCTAGCAAATTCACATCAGAAAATCCCTTTTTCCTTGTCACTTTAACTTGTACGAAGGAAAATATAATCAGACGCCCGCATGTGCCTAGTAACTTTGTGAGAAAGTATTTGTTAAAGGAGGAGAAAATGATGAAGATACAGTTTAGAAAGAAAGTATCGCCCGTAAAGCTTGTATTTAGTAAATACGGTGCTACAGGCACGCTCTCTTGTGGTTGGGGCTCATTTGCAAGAAAAAATAAACTGCAACTGGGAGATGTTTGTATCTTTGAGCTCCTCAATAGAGAAGAAGCATTACTTCATCTTCATGTTTTCAGAGGCCACAGTGAG 1476 0.3909 SEKSPFEFSPSGLISTSYDMTSSHNKQHLHAVVRFFKIILGTSLADGEIRLPKYFTRKYENGMSNPVFLKPPDGTEWKIYWTKHDGETWFQKGWKEFATYYSLDHGHLLFFEYEGTSYFDVHIFGKSAVEINYPSHGNHDGNSSIMQIIDDSVEIVDEKFSCQKTRVKSRVLSLQPCEKMKNNTTTNDERCPNGVNLHQDVQTRSTSSQEEKIIMKRKLDEDEGKSIFHTECPKVEKLTSTVLQKATTFRSDHPYFMLVMKPSFINGDYLKIPPQFSEQYLKITRAVVLLEVLDGRSWPVIYSASRICGGWQKFASENNLNVGNVCFFELIQKIQGLAFKVSIFQGADKPSCPVSQGGTSSQRSSGLKSHFKSKDLTTIALEEASKFTSENPFFLVTLTCTKENIIRRPHVPSNFVRKYLLKEEKMMKIQFRKKVSPVKLVFSKYGATGTLSCGWGSFARKNKLQLGDVCIFELLNREEALLHLHVFRGHSE 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9802g00002 492 Pfam B3 DNA binding domain 408 488 IPR003340 GO:0003677
Mupr9802g00002 492 Pfam B3 DNA binding domain 44 125 IPR003340 GO:0003677
Mupr9802g00002 492 Pfam B3 DNA binding domain 258 345 IPR003340 GO:0003677
Mupr9802g00002 492 SMART B3_2 256 347 IPR003340 GO:0003677
Mupr9802g00002 492 SMART B3_2 35 127 IPR003340 GO:0003677
Mupr9802g00002 492 SMART B3_2 394 490 IPR003340 GO:0003677
Mupr9802g00002 492 SUPERFAMILY DNA-binding pseudobarrel domain 387 488 IPR015300 -
Mupr9802g00002 492 CDD B3_DNA 34 124 IPR003340 GO:0003677
Mupr9802g00002 492 Gene3D - 29 128 IPR015300 -
Mupr9802g00002 492 ProSiteProfiles B3 DNA-binding domain profile. 394 490 IPR003340 GO:0003677
Mupr9802g00002 492 SUPERFAMILY DNA-binding pseudobarrel domain 250 345 IPR015300 -
Mupr9802g00002 492 CDD B3_DNA 254 344 IPR003340 GO:0003677
Mupr9802g00002 492 PANTHER B3 DOMAIN-CONTAINING 378 478 - -
Mupr9802g00002 492 Gene3D - 235 348 IPR015300 -
Mupr9802g00002 492 Gene3D - 374 490 IPR015300 -
Mupr9802g00002 492 CDD B3_DNA 392 488 IPR003340 GO:0003677
Mupr9802g00002 492 ProSiteProfiles B3 DNA-binding domain profile. 34 127 IPR003340 GO:0003677
Mupr9802g00002 492 ProSiteProfiles B3 DNA-binding domain profile. 255 347 IPR003340 GO:0003677
Mupr9802g00002 492 SUPERFAMILY DNA-binding pseudobarrel domain 33 127 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9802g00002 Mupr-Chr9802 7896 10769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9802g00002 380 488 B3 DNA Binding Superfamily AT3G18990 33.929 6.54e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr9802g00002 B3 1e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9802g00002 - - ccaj:109794243 597.43