Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9787g00002 ATGAGGTGTGATCTCTTTAAGTGCTGCTTCACTAGCACTTCTTCTGAGACATTTTCAAAGCACAGTAAGTGGCGAATCTTGCCCTACAAGAAACTAGCAAAAGTCACAAATAATTTTGATCAATCTCATTGTCTTGGAAAGAGAGGCTTTGCCACTGAATATTACGGAAAACTTGAGGATGGGCGTGAGATTACGATCCAGTGCTTTAACAAAGACAAGAACCACATATTGCAACAGTTTATCAATGAAACTACTATCCTAAATTACTTGCCTCACAAAAATATTGTGTCAATTTACGGGTGTGCTTCTCATCACGAGGAATCCCTGCTAGTGCATGAATACCTATCCAATGGCAATCTTGCTGCTCATCTTCAAAGTGAAATGGCCGGAAACAGCACACTACCCTGGCTGACTCGATTGGATATAGCCATTGATATTGCAAATGCATTGGACTATCTTCACTATTATGGCATCATCCACCGCAATGTGAAGTCCAGCAATATTCTCCTAGATGTGAACTTTTGTGCTAAACTTGCTAACCTTCATTTATCACGGAAACTTCCAGATGGTGTTCCTGTTTATGCCACCCATGTTACTAGTGATATAACTGGGACATGTGGTTATATGGACCCAGAGTACTTAACAAAAGGTCAGCTTAGCGTCAAAAATGATGTTTATAGCTTTGGGGTGGTGTTGTGTGAGCTTCTATCGGCTAAGTTGGCAAAACACTGGATTCTGGATGAAGAGGATAATCTTGCTACCATTTTAATCAGAAAAGTTGAGAACCAAGCTTTGGTGGAGCTGTTGGATCCAAGACTTGGCTTCCAATCAAACCTTAAGATCAAGCGGATGGTGACTGCTACTGCTGAGCTTGCACTTTTATGCATGAAATGTCCACAAGAATCAAGGCCAAACATGGAACAGGTGCTAGAGATGCTCGATGGCATAAAGCAAGGGAGATATGAAACAAACTCAACAAAAGCTTTGAAAGTCTTCCACCATGCTGAACTTGAAGAAGCTACTAACAATTTTAACACTTGCCTTGGAAAGGGAGGGTATGGCACTGTGTACTATGGAAAACTTCAAGATGGGCGAGAGGTTGCAATAAAATGTTTCCACGAAGACAACGAGACAGAAAAGACCATTAAGCAATTCATGAAAGAAACTGAGATCTTAAGTCTCTTGCACCATCAAAATCTGGTTTCGCTCTACGGCCGCACTTCTCGCCACAGCAACAGACACATGCTAGTGTATGAGTACATCGCCAATGGCACTCTCTCTAAACATCTTCATGAATCTTCCTGTGCTAAACTACCATGGCATACCAGATTGAATATTGCCATTGAAACTGCAGCCGCCTTGGTATATCTTCATGACTCAGGTATCATCCACCGTGATGTAAAAGGGAGTAATATTCTGTTGGATGAAAGTTTTACTGTTAAAGTTGCAGATTTTGGATTCTCACGGTTTCTTCCAGATTTTACTACTCATGTTTCCACTATTCCAGTAGGAACTCGTGCTTACATAGATCCTGACTACTATGAATCTGGAAGGGTGAGTGACAAAAGTGATGTCTATAGCTTTGGGGTGGTCTTGTTTGAACTCATATCATCCAACCGCCCAAGTTTAATGGAAGGCACAGATTATGTTACTCTTGCACAGTTTGCAAAGAGAAAAATCTTGAACAAGGAATTAAATGCTGTAGTGGATCCAAGTTTTTGGTTTGGTGTTGACAACAACATGATGGAAATGATAACAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGAACTTAGACCATCCATGAAACAGGTGCTAGAGACCCTTGAGGGCATAAGGAGAGGAACATGGGGATTCAACCAGATAACATAA 1884 0.4135 MRCDLFKCCFTSTSSETFSKHSKWRILPYKKLAKVTNNFDQSHCLGKRGFATEYYGKLEDGREITIQCFNKDKNHILQQFINETTILNYLPHKNIVSIYGCASHHEESLLVHEYLSNGNLAAHLQSEMAGNSTLPWLTRLDIAIDIANALDYLHYYGIIHRNVKSSNILLDVNFCAKLANLHLSRKLPDGVPVYATHVTSDITGTCGYMDPEYLTKGQLSVKNDVYSFGVVLCELLSAKLAKHWILDEEDNLATILIRKVENQALVELLDPRLGFQSNLKIKRMVTATAELALLCMKCPQESRPNMEQVLEMLDGIKQGRYETNSTKALKVFHHAELEEATNNFNTCLGKGGYGTVYYGKLQDGREVAIKCFHEDNETEKTIKQFMKETEILSLLHHQNLVSLYGRTSRHSNRHMLVYEYIANGTLSKHLHESSCAKLPWHTRLNIAIETAAALVYLHDSGIIHRDVKGSNILLDESFTVKVADFGFSRFLPDFTTHVSTIPVGTRAYIDPDYYESGRVSDKSDVYSFGVVLFELISSNRPSLMEGTDYVTLAQFAKRKILNKELNAVVDPSFWFGVDNNMMEMITAVAELAFQCVQCPKELRPSMKQVLETLEGIRRGTWGFNQIT 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9787g00002 627 Gene3D Phosphorylase Kinase; domain 1 11 114 - -
Mupr9787g00002 627 Gene3D Phosphorylase Kinase; domain 1 317 420 - -
Mupr9787g00002 627 Pfam Protein tyrosine and serine/threonine kinase 45 313 IPR001245 GO:0004672|GO:0006468
Mupr9787g00002 627 Pfam Protein tyrosine and serine/threonine kinase 345 613 IPR001245 GO:0004672|GO:0006468
Mupr9787g00002 627 FunFam Wall-associated receptor kinase 3 421 627 - -
Mupr9787g00002 627 ProSiteProfiles Protein kinase domain profile. 39 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9787g00002 627 Gene3D Transferase(Phosphotransferase) domain 1 117 316 - -
Mupr9787g00002 627 SUPERFAMILY Protein kinase-like (PK-like) 325 617 IPR011009 -
Mupr9787g00002 627 SMART serkin_6 39 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9787g00002 627 SMART serkin_6 342 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr9787g00002 627 FunFam LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform A 11 114 - -
Mupr9787g00002 627 SUPERFAMILY Protein kinase-like (PK-like) 16 313 IPR011009 -
Mupr9787g00002 627 FunFam Wall-associated receptor kinase 3 115 332 - -
Mupr9787g00002 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Mupr9787g00002 627 Gene3D Transferase(Phosphotransferase) domain 1 421 621 - -
Mupr9787g00002 627 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 328 619 IPR044652 GO:0004672
Mupr9787g00002 627 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Mupr9787g00002 627 ProSiteProfiles Protein kinase domain profile. 342 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9787g00002 Mupr-Chr9787 16920 19482 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9787g00002 329 617 Receptor kinase-like Gene Family AT1G25390 51.689 9.59e-90 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mupr9787g00002 PK_Tyr_Ser-Thr 7.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9787g00002 - - gmx:100801413 1125.15