Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9783g00006 ATGGAATATACTTATTCAGCAGAAGCAGAAACTTACACAAGTAGCAGCACCAGCCCACCAAGTGCCATGAGAAAGAAGAGAAACAGCAACACAAGAAGGTTCAGTGATGAACAAATCAAATCATTGGAAACTATGTTTGAGACAGAGTCAAGGCTTGAGCCTAGAAAGAAGCTACAGCTTGCAAGAGAGCTTGGATTGCAGCCAAGACAGGTTGCTATATGGTTTCAGAACAAGAGAGCTAGGTGGAAGTCAAAGCAACTAGAGAGAGACTATACCATACTCCAAACCAATTACAACACTTTGGCTTCACGTTTTGAAGCTCTAAAGAAGGAAAAGCAAACATTGCTAATTCAGCTGCAGAAGCTGAATCATCTAATACAGAAGCCAATGGAGCCAAGTCAGAGATGCACACAAGTTGAAGCAGCAAACATCATGGACAGTGAATCAGAAAATGGGGGCACCATGAAATGTGAAGCTGAGATGAAGCCAAGCCCATCAATGGAAAGATCAGAACATGTACTTGGTGTTCTGTCTGATGATGACACCAGCATAAAGGTGGAAGACTTTGGCCTAGAAGATGAAACTGGTCTTCTGAATTTTGTTAAGCATGCTGATGGTTCCTTGTCTTCACCAGAAGATTGGGGTGCTTTTGAATCCAATGATCTCTTAGACCAATCAACTAGTGATTACCAATGGTGGGACTTCTGGTCCTGA 714 0.4244 MEYTYSAEAETYTSSSTSPPSAMRKKRNSNTRRFSDEQIKSLETMFETESRLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLERDYTILQTNYNTLASRFEALKKEKQTLLIQLQKLNHLIQKPMEPSQRCTQVEAANIMDSESENGGTMKCEAEMKPSPSMERSEHVLGVLSDDDTSIKVEDFGLEDETGLLNFVKHADGSLSSPEDWGAFESNDLLDQSTSDYQWWDFWS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9783g00006 237 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 26 168 IPR045224 GO:0003700
Mupr9783g00006 237 SUPERFAMILY Homeodomain-like 12 87 IPR009057 -
Mupr9783g00006 237 Coils Coil 105 125 - -
Mupr9783g00006 237 Gene3D - 11 88 - -
Mupr9783g00006 237 Pfam Homeodomain 32 83 IPR001356 GO:0003677
Mupr9783g00006 237 PRINTS Lambda-repressor HTH signature 56 65 IPR000047 GO:0003677
Mupr9783g00006 237 PRINTS Lambda-repressor HTH signature 65 81 IPR000047 GO:0003677
Mupr9783g00006 237 ProSitePatterns 'Homeobox' domain signature. 60 83 IPR017970 GO:0000981|GO:0006355
Mupr9783g00006 237 FunFam Homeobox-leucine zipper protein ATHB-7 12 85 - -
Mupr9783g00006 237 CDD homeodomain 24 86 IPR001356 GO:0003677
Mupr9783g00006 237 MobiDBLite consensus disorder prediction 1 36 - -
Mupr9783g00006 237 ProSiteProfiles 'Homeobox' domain profile. 25 85 IPR001356 GO:0003677
Mupr9783g00006 237 Pfam Homeobox associated leucine zipper 85 126 IPR003106 GO:0006355|GO:0043565
Mupr9783g00006 237 SMART HOX_1 23 89 IPR001356 GO:0003677
Mupr9783g00006 237 MobiDBLite consensus disorder prediction 7 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9783g00006 Mupr-Chr9783 66035 66843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9783g00006 16 237 Homeobox Transcription Factor Family AT2G46680 50.000 6.38e-63 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr9783g00006 Homeodomain 6.3e-16 CL0123